Automated Organization Profile

Columbia University

Current S-Index

7,331.3

Sum of Dataset Indices for all datasets

Average Dataset Index per Dataset

1.0

Average Dataset Index per dataset

Total Datasets

7,192

Total datasets in this organization

Average FAIR Score

51.0%

Average FAIR Score per dataset

Total Citations

5,440

Total citations to the organization's datasets

Total Mentions

0

Total mentions of the organization's datasets

S-Index Interpretation

S-Index Over Time

Cumulative Citations Over Time

Cumulative Mentions Over Time

Datasets

Limited datasets
Only the first 500 datasets are displayed.

Expected Idiosyncratic Volatility

No description available

Authors

  • Bekaert, Geert ;
  • Bergbrant, Mikael ;
  • Kassa, Haim
0 Citations0 Mentions65% FAIR1.6 Dataset Index
10.17632/crndvns9bn.12026

Expected Idiosyncratic Volatility

No description available

Authors

  • Bekaert, Geert ;
  • Bergbrant, Mikael ;
  • Kassa, Haim
0 Citations0 Mentions65% FAIR1.6 Dataset Index
10.17632/crndvns9bn2026

T cell responses towards PINK1 and ⍺-synuclein are elevated in prodromal Parkinson's disease - Fluorospot data

Antigen-specific T cell reactivity in PBMCs were studied using the Fluorospot assayPBMCs were co-cultured with alpha-synuclein, (⍺-syn) PINK1, or Epstein-Barr virus peptide pools and subsequently expanded in vitro over a two-week period. Cultures were supplemented with IL-2 (10 U/mL) every 4 days. After two weeks, expanded cells were harvested and were re-stimulated in triplicates with the same peptide pools, dimethylsulfoxide (DMSO; as a negative control) and phytohemagglutinin (PHA; as a positive control) and then processed for a dual-color (interferon-gamma and IL-5) Fluorospot assay (Mabtech). Spot forming cells (SFC) were captured using an IRIS Fluorospot reader (Mabtech) and results were analyzed using Excel (Microsoft). To be considered positive, antigen-specific T cells had >100 SFC per million PBMC, p-value <0.05 and >2 fold increase when compared to the DMSO control.Note: “ND” refers to “no data”, as some samples either did not have the adequate amount of cells for testing or did not pass our SFC quality control criteria. The "Sum of ⍺-syn and PINK1 IFNγ SFC/10^6 cultured cells" and "Sum of ⍺-syn and PINK1 IL-5 SFC/10^6 cultured cells" was only calculated for donors screen with both PINK1 and ⍺-syn.In the Unified Parkinson’s Disease Rating Scale (UPDRS) part III and the Montreal Cognitive Assessment (MoCA) tests columns, donors not tested were assigned "Not tested".

Authors

  • Johansson, Emil ;
  • Sulzer, David ;
  • Lindestam Arlehamn, Cecilia ;
  • Sette, Alessandro
0 Citations0 Mentions79% FAIR0.3 Dataset Index
10.5281/zenodo.149341222025

T cell responses towards PINK1 and ⍺-synuclein are elevated in prodromal Parkinson's disease - Fluorospot data

Antigen-specific T cell reactivity in PBMCs were studied using the Fluorospot assayPBMCs were co-cultured with alpha-synuclein, (⍺-syn) PINK1, or Epstein-Barr virus peptide pools and subsequently expanded in vitro over a two-week period. Cultures were supplemented with IL-2 (10 U/mL) every 4 days. After two weeks, expanded cells were harvested and were re-stimulated in triplicates with the same peptide pools, dimethylsulfoxide (DMSO; as a negative control) and phytohemagglutinin (PHA; as a positive control) and then processed for a dual-color (interferon-gamma and IL-5) Fluorospot assay (Mabtech). Spot forming cells (SFC) were captured using an IRIS Fluorospot reader (Mabtech) and results were analyzed using Excel (Microsoft). To be considered positive, antigen-specific T cells had >100 SFC per million PBMC, p-value <0.05 and >2 fold increase when compared to the DMSO control.Note: “ND” refers to “no data”, as some samples either did not have the adequate amount of cells for testing or did not pass our SFC quality control criteria. The "Sum of ⍺-syn and PINK1 IFNγ SFC/10^6 cultured cells" and "Sum of ⍺-syn and PINK1 IL-5 SFC/10^6 cultured cells" was only calculated for donors screen with both PINK1 and ⍺-syn.In the Unified Parkinson’s Disease Rating Scale (UPDRS) part III and the Montreal Cognitive Assessment (MoCA) tests columns, donors not tested were assigned "Not tested".

Authors

  • Johansson, Emil ;
  • Sulzer, David ;
  • Lindestam Arlehamn, Cecilia ;
  • Sette, Alessandro
0 Citations0 Mentions79% FAIR0.3 Dataset Index
10.5281/zenodo.149341232025

Archaeal lipid biomarker (GDGT) distributions in central Arctic Ocean sediments

This dataset includes GDGT measurements in an Arctic Ocean sediment core and surface sediments.

Authors

  • Martens, Jannik ;
  • Hurley, Sarah
0 Citations0 Mentions79% FAIR0.3 Dataset Index
10.5281/zenodo.155056872025

Data and Reproduction package for: "A NICER view of the 1.4 solar-mass edge-on pulsar PSR J0614-3329" (Version: 1.0.0)

Posterior samples and mass-radius contours for the headline result of the millisecond pulsar PSR J0614−3329, whose analysis is presented in "A NICER view of the 1.4 M⊙ edge-on pulsar PSR J0614−3329" by Mauviard et al. (2025; arxiv:2506:14883)Also included are: supplementary figures, as well as data and reproduction package of all the X-PSI and NEoST runs.Please refer to the README for detailed information.

Authors

  • Mauviard, Lucien ;
  • Guillot, Sebastien ;
  • Salmi, Tuomo ;
  • Choudhury, Devarshi ;
  • Dorsman, Bas ;
  • González-Caniulef, Denis ;
  • Hoogkamer, Mariska ;
  • Huppenkothen, Daniela ;
  • Kazantsev, Christine ;
  • Kini, Yves ;
  • Olive, Jean-François ;
  • Stammler, Pierre ;
  • Watts, Anna ;
  • Mendes, Melissa ;
  • Rutherford, Nathan ;
  • Schwenk, Achim ;
  • Svensson, Isak ;
  • Bogdanov, Slavko ;
  • Kerr, Matthew ;
  • Ray, Paul ;
  • Guillemot, Lucas ;
  • Cognard, Ismaël ;
  • Theureau, Gilles
2 Citations0 Mentions69% FAIR2.2 Dataset Index
10.5281/zenodo.156034052025

AedesTraits (Version: 1)

AedesTraits is a fully open, machine-readable database that adheres to VecTraits standards, focusing on the temperature dependence of different types of traits (e.g., life--history, behavioural, morphological) in four Aedes species: Ae. aegypti, Ae. albopictus, Ae. japonicus, and Ae. koreicus. This database consolidates experimental data from diverse published literature dating from 1930s to 2025. AedesTraits captures trait variation across species, populations, and environmental conditions.

Authors

  • Huxley, Paul J. ;
  • Da Re, Daniele ;
  • Andreo, Veronica ;
  • San Miguel, Tomas Valentin ;
  • Blaha, Margo ;
  • Rosà, Roberto ;
  • Rizzoli, Annapaola ;
  • Harrison, Joe ;
  • Sorek, Sean ;
  • Johnson, Leah R.
1 Citation0 Mentions81% FAIR2.0 Dataset Index
10.5281/zenodo.151499032025

ReESH_US-VT1: Vermillion Tributary Paired Cropland – Site 1 (Corn/Soy; No Cover Crops)

Regional Ecosystem Soil Hydraulics (ReESH) Project:US-VT1: Vermillion Tributary Paired Cropland – Site 1 (Corn/Soy; No Cover Crops)The ReESH Database includes soil characteristics of soil samples and corresponding soil water retention curves, which enable the conversion of soil water content to soil water potential.Database Files: 1) Soil Characteristics:"Site" -- Site Name (AmeriFlux Site Code)"Sample_ID" -- Unique Sample Identifier "Sampling_Date" -- Date of Sample Collection (YYYY-MM-DD)"Latitude" -- Site Latitude"Longitude" -- Site Longitude"Veg" -- International Geosphere-Biosphere Program (IGBP) "Depth_cm" -- Sample Collection Depth (cm)"Depth" -- Sample Collection Depth (cm)"CLAY" -- Percent Clay (%)"SILT" -- Percent Silt (%)"SAND" -- Percent Sand (%)"RootBiomass_g" -- Fine Root biomass (g per 250mL soil)"Pct_OM" -- Percent Organic Matter (%)"Bulk_Den_g_m3" -- Sample Bulk Density (g m^-3)"Med_KsSoil_m_s" -- Median Saturated Hydraulic Conductivity (m s^-1) -minimum three replicates"Min_KsSoil_m_s" -- Minimum Saturated Hydraulic Conductivity (m s^-1) -minimum three replicates"Max_KsSoil_m_s" -- Maximum Saturated Hydraulic Conductivity (m s^-1) -minimum three replicates"SD_KsSoil_m_s" -- Standard Deviation in Saturated Hydraulic Conductivity (m s^-1) -minimum three replicates"KS_Soil_Flag" -- QAQC flags for Saturated Hydraulic Conductivity measurements (0==good; 1==suspect and use with caution)2) Soil Water Retention Curves:"Site" -- Site Name (AmeriFlux Site Code)"Sample_ID" -- Unique Sample Identifier "Plot" -- Site Personnel Defined Pit Identifier "Depth_cm" -- Sample Collection Depth (cm)"MPa_Abs" -- Sample Water Potential (-MPa)"Vol_Water" -- Sample Water Content (%)"Hypropfilter" -- Instrument Code (1==WP4C; 2==HyProp)"Sampling_Date" -- Date of Sample Collection (YYYY-MM-DD)"Bulk_Den_g_m3" -- Sample Bulk Density (g m^-3)

Authors

  • Key, Kesondra ;
  • Novick, Kimberly ;
  • Voyles, Michael ;
  • Scott, Steve ;
  • Gress, Trevor ;
  • Crookshanks, Alex ;
  • Beverly, Daniel
0 Citations0 Mentions79% FAIR0.3 Dataset Index
10.5281/zenodo.171437202025

Electrical Resistivity Data Supporting Geomorphic and Geophysical Evidence for Late Quaternary Surface-Rupturing Earthquakes in Northeast United States

This dataset contains DC electrical resistivity measurements supporting the analysis in Geomorphic and Geophysical Evidence for Quaternary Surface-Rupturing Earthquakes in Northeast United States.The datasets were collected with ABEM Terrameter LS2 64-electrode resistivity meter.The datasets include:1. Electrical resistivity tomography (ERT) raw dataset for a 630-m long profile (ERT profile 1) with 10m electrode spacing, across a cluster of fault scarps in Tewksbury, New Jersey, US. The data is in .DAT format, and is provided in two versions: one containing elevation of each station and another without elevation information.2. Electrical resistivity tomography (ERT) raw dataset for a 63-m long profile (ERT profile 2) with 1m electrode spacing, across a single target fault scarp in Tewksbury, New Jersey, US. The data is in .DAT format, and is provided with a version containing elevation of each station and another version without elevation information.

Authors

  • Kolawole, Folarin ;
  • Ohenhen, Leonard ;
  • Yiannias, Mia ;
  • Colet, Meritxell ;
  • Le, Huy ;
  • Ajala, Rasheed ;
  • Ramarolahy, Andry ;
  • Kornfeld, Lela ;
  • Mitchell, Alexa
0 Citations0 Mentions79% FAIR0.3 Dataset Index
10.5281/zenodo.172108932025

ReESH_US-VT2: Vermillion Tributary Paired Cropland – Site 2 (Corn/Soy; Cover Crops)

Regional Ecosystem Soil Hydraulics (ReESH) Project:US-VT2: Vermillion Tributary Paired Cropland – Site 2 (Corn/Soy; Cover Crops)The ReESH Database includes soil characteristics of soil samples and corresponding soil water retention curves, which enable the conversion of soil water content to soil water potential.Database Files: 1) Soil Characteristics:"Site" -- Site Name (AmeriFlux Site Code)"Sample_ID" -- Unique Sample Identifier "Sampling_Date" -- Date of Sample Collection (YYYY-MM-DD)"Latitude" -- Site Latitude"Longitude" -- Site Longitude"Veg" -- International Geosphere-Biosphere Program (IGBP) "Depth_cm" -- Sample Collection Depth (cm)"Depth" -- Sample Collection Depth (cm)"CLAY" -- Percent Clay (%)"SILT" -- Percent Silt (%)"SAND" -- Percent Sand (%)"RootBiomass_g" -- Fine Root biomass (g per 250mL soil)"Pct_OM" -- Percent Organic Matter (%)"Bulk_Den_g_m3" -- Sample Bulk Density (g m^-3)"Med_KsSoil_m_s" -- Median Saturated Hydraulic Conductivity (m s^-1) -minimum three replicates"Min_KsSoil_m_s" -- Minimum Saturated Hydraulic Conductivity (m s^-1) -minimum three replicates"Max_KsSoil_m_s" -- Maximum Saturated Hydraulic Conductivity (m s^-1) -minimum three replicates"SD_KsSoil_m_s" -- Standard Deviation in Saturated Hydraulic Conductivity (m s^-1) -minimum three replicates"KS_Soil_Flag" -- QAQC flags for Saturated Hydraulic Conductivity measurements (0==good; 1==suspect and use with caution)2) Soil Water Retention Curves:"Site" -- Site Name (AmeriFlux Site Code)"Sample_ID" -- Unique Sample Identifier "Plot" -- Site Personnel Defined Pit Identifier "Depth_cm" -- Sample Collection Depth (cm)"MPa_Abs" -- Sample Water Potential (-MPa)"Vol_Water" -- Sample Water Content (%)"Hypropfilter" -- Instrument Code (1==WP4C; 2==HyProp)"Sampling_Date" -- Date of Sample Collection (YYYY-MM-DD)"Bulk_Den_g_m3" -- Sample Bulk Density (g m^-3)

Authors

  • Key, Kesondra ;
  • Novick, Kimberly ;
  • Voyles, Michael ;
  • Scott, Steve ;
  • Gress, Trevor ;
  • Beverly, Daniel ;
  • Crookshanks, Alex
0 Citations0 Mentions79% FAIR0.3 Dataset Index
10.5281/zenodo.172106432025