Automated Organization Profile

IFREMER, Unité de Géosciences Marines, Plouzané, France.

Current S-Index

0.4

Sum of Dataset Indices for all datasets

Average Dataset Index per Dataset

0.2

Average Dataset Index per dataset

Total Datasets

2

Total datasets in this organization

Average FAIR Score

76.0%

Average FAIR Score per dataset

Total Citations

0

Total citations to the organization's datasets

Total Mentions

0

Total mentions of the organization's datasets

S-Index Interpretation

S-Index Over Time

Cumulative Citations Over Time

Cumulative Mentions Over Time

Datasets

A simplified palaeoceanography archiving system (PARIS) and GUI for storage and visualisation of marine sediment core proxy data vs age and depth.

Scientific discovery can be aided when data is shared following the principles of findability, accessibility, interoperability, reusability (FAIR) data (Wilkinson et al., 2016). Recent discussions in the palaeoclimate literature have focussed on defining the ideal database format for storing data and associated metadata. Here, we highlight an often overlooked primary process in widespread adoption of FAIR data, namely the systematic creation of machine readable data at source (i.e. at the field and laboratory level). We detail a file naming and structuring method that was used at LSCE to store data in text file format in a way that is machine-readable, and also human-friendly to persons of all levels of computer proficiency, thus encouraging the adoption of a machine-readable ethos at the very start of a project. Thanks to the relative simplicity of downcore palaeoclimate data, we demonstrate the power of this simple but powerful file format to function as a basic database in itself: we provide a Matlab-based GUI tool that allows users to search and visualise data by sediment core location, proxy type and species type. The adoption of similarily accessible, machine-readable file formats at other laboratories will promote data sharing within projects, while also allowing for the automation of submission of data to online database repositories with particular formatting and/or metadata requirements, thus reducing post-hoc workload.

Authors

  • Lougheed, Bryan C. ;
  • Waelbroeck, Claire ;
  • Smialkowski, Nicolas ;
  • Riveiros, Natalia Vazquez ;
  • Obrochta, Stephen P.
0 Citations0 Mentions79% FAIR0.1 Dataset Index
10.5281/zenodo.46807172021

A simplified palaeoceanography archiving system (PARIS) and GUI for storage and visualisation of marine sediment core proxy data vs age and depth.

Scientific discovery can be aided when data is shared following the principles of findability, accessibility, interoperability, reusability (FAIR) data (Wilkinson et al., 2016). Recent discussions in the palaeoclimate literature have focussed on defining the ideal database format for storing data and associated metadata. Here, we highlight an often overlooked primary process in widespread adoption of FAIR data, namely the systematic creation of machine readable data at source (i.e. at the field and laboratory level). We detail a file naming and structuring method that was used at LSCE to store data in text file format in a way that is machine-readable, and also human-friendly to persons of all levels of computer proficiency, thus encouraging the adoption of a machine-readable ethos at the very start of a project. Thanks to the relative simplicity of downcore palaeoclimate data, we demonstrate the power of this simple but powerful file format to function as a basic database in itself: we provide a Matlab-based GUI tool that allows users to search and visualise data by sediment core location, proxy type and species type. The adoption of similarily accessible, machine-readable file formats at other laboratories will promote data sharing within projects, while also allowing for the automation of submission of data to online database repositories with particular formatting and/or metadata requirements, thus reducing post-hoc workload.

Authors

  • Lougheed, Bryan C. ;
  • Waelbroeck, Claire ;
  • Smialkowski, Nicolas ;
  • Riveiros, Natalia Vazquez ;
  • Obrochta, Stephen P.
0 Citations0 Mentions73% FAIR0.4 Dataset Index
10.5281/zenodo.51159932021