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Automated Author Profile

Castello, Alfredo

Current S-Index

12.1

Sum of Dataset Indices for all datasets

Average Dataset Index per Dataset

1.1

Average Dataset Index per dataset

Total Datasets

11

Total datasets for this author

Average FAIR Score

57.9%

Average FAIR Score per dataset

Total Citations

3

Total citations to the author's datasets

Total Mentions

0

Total mentions of the author's datasets

S-Index Interpretation

S-Index Over Time

Cumulative Citations Over Time

Cumulative Mentions Over Time

Datasets

The PAZ domain of Aedes aegypti Dicer 2 is critical for length determination of virus-derived interfering RNAs, and antiviral activity of the exogenous siRNA pathway

No description available

Authors

  • Reuter, Melinda ;
  • Parry, Rhys ;
  • McFarlane, Melanie ;
  • Gestuveo, Rommel J. ;
  • Khromykh, Alexander A. ;
  • Redecke, Lars ;
  • Schnettler, Esther ;
  • Kohl, Alain ;
  • Arif, Rozeena ;
  • Brennan, Benjamin ;
  • Castello, Alfredo
1 Citation0 Mentions73% FAIR1.1 Dataset Index
10.5525/gla.researchdata.1479January 2025

nRBP_Kamel et al 2024

Raw data for western bloting and microscopy

Authors

  • Kamel, Wael ;
  • Ruscica, Vincenzo ;
  • Embarc, Azman ;
  • Castello, Alfredo
0 Citations0 Mentions65% FAIR0.7 Dataset Index
10.17632/7ywbz72rt2November 2024

nRBP_Kamel et al 2024

Raw data for western bloting and microscopy

Authors

  • Kamel, Wael ;
  • Ruscica, Vincenzo ;
  • Embarc, Azman ;
  • Castello, Alfredo
0 Citations0 Mentions65% FAIR0.7 Dataset Index
10.17632/7ywbz72rt2.1November 2024

Additional file 4: Table S3. of RNA-binding activity of TRIM25 is mediated by its PRY/SPRY domain and is required for ubiquitination

Supplementary data showing gene names and number of RNA reads derived from three independent T7-TRIM25 CLIP-seq experiments. (XLSX 117 kb)

Authors

  • Choudhury, Nila ;
  • Heikel, Gregory ;
  • Trubitsyna, Maryia ;
  • Kubik, Peter ;
  • Nowak, Jakub ;
  • Webb, Shaun ;
  • Granneman, Sander ;
  • Spanos, Christos ;
  • Rappsilber, Juri ;
  • Castello, Alfredo ;
  • Gracjan Michlewski
1 Citation0 Mentions13% FAIR0.5 Dataset Index
10.6084/m9.figshare.c.3925501_d4.v1January 2017

Additional file 3: Table S2. of RNA-binding activity of TRIM25 is mediated by its PRY/SPRY domain and is required for ubiquitination

Supplementary data showing protein names, SILAC ratios (more than two-fold), peptide counts, and peptide intensities identified by SILAC MS in wild-type and TRIM25 KO HeLa cells. (XLSX 33 kb)

Authors

  • Choudhury, Nila ;
  • Heikel, Gregory ;
  • Trubitsyna, Maryia ;
  • Kubik, Peter ;
  • Nowak, Jakub ;
  • Webb, Shaun ;
  • Granneman, Sander ;
  • Spanos, Christos ;
  • Rappsilber, Juri ;
  • Castello, Alfredo ;
  • Gracjan Michlewski
0 Citations0 Mentions13% FAIR0.1 Dataset Index
10.6084/m9.figshare.c.3925501_d3.v1January 2017

Additional file 2: Table S1. of RNA-binding activity of TRIM25 is mediated by its PRY/SPRY domain and is required for ubiquitination

Supplementary data showing protein names, SILAC ratios, peptide counts, and peptide intensities identified by SILAC MS in T7-TRIM25, T7-TRIM25Î RBD, and T7-TRIM25â +â RNases co-immunoprecipitation assays. (XLSX 22 kb)

Authors

  • Choudhury, Nila ;
  • Heikel, Gregory ;
  • Trubitsyna, Maryia ;
  • Kubik, Peter ;
  • Nowak, Jakub ;
  • Webb, Shaun ;
  • Granneman, Sander ;
  • Spanos, Christos ;
  • Rappsilber, Juri ;
  • Castello, Alfredo ;
  • Gracjan Michlewski
1 Citation0 Mentions13% FAIR0.5 Dataset Index
10.6084/m9.figshare.c.3925501_d2.v1January 2017

Additional file 2: Table S1. of RNA-binding activity of TRIM25 is mediated by its PRY/SPRY domain and is required for ubiquitination

Supplementary data showing protein names, SILAC ratios, peptide counts, and peptide intensities identified by SILAC MS in T7-TRIM25, T7-TRIM25Î RBD, and T7-TRIM25â +â RNases co-immunoprecipitation assays. (XLSX 22 kb)

Authors

  • Choudhury, Nila ;
  • Heikel, Gregory ;
  • Trubitsyna, Maryia ;
  • Kubik, Peter ;
  • Nowak, Jakub ;
  • Webb, Shaun ;
  • Granneman, Sander ;
  • Spanos, Christos ;
  • Rappsilber, Juri ;
  • Castello, Alfredo ;
  • Gracjan Michlewski
0 Citations0 Mentions85% FAIR1.8 Dataset Index
10.6084/m9.figshare.c.3925501_d2January 2017

Additional file 3: Table S2. of RNA-binding activity of TRIM25 is mediated by its PRY/SPRY domain and is required for ubiquitination

Supplementary data showing protein names, SILAC ratios (more than two-fold), peptide counts, and peptide intensities identified by SILAC MS in wild-type and TRIM25 KO HeLa cells. (XLSX 33 kb)

Authors

  • Choudhury, Nila ;
  • Heikel, Gregory ;
  • Trubitsyna, Maryia ;
  • Kubik, Peter ;
  • Nowak, Jakub ;
  • Webb, Shaun ;
  • Granneman, Sander ;
  • Spanos, Christos ;
  • Rappsilber, Juri ;
  • Castello, Alfredo ;
  • Gracjan Michlewski
0 Citations0 Mentions85% FAIR1.8 Dataset Index
10.6084/m9.figshare.c.3925501_d3January 2017

Additional file 4: Table S3. of RNA-binding activity of TRIM25 is mediated by its PRY/SPRY domain and is required for ubiquitination

Supplementary data showing gene names and number of RNA reads derived from three independent T7-TRIM25 CLIP-seq experiments. (XLSX 117 kb)

Authors

  • Choudhury, Nila ;
  • Heikel, Gregory ;
  • Trubitsyna, Maryia ;
  • Kubik, Peter ;
  • Nowak, Jakub ;
  • Webb, Shaun ;
  • Granneman, Sander ;
  • Spanos, Christos ;
  • Rappsilber, Juri ;
  • Castello, Alfredo ;
  • Gracjan Michlewski
0 Citations0 Mentions85% FAIR1.8 Dataset Index
10.6084/m9.figshare.c.3925501_d4January 2017

The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs

iCLIP data from publication The RNA-binding proteomes from yeast to manharbour conserved enigmRBPs. Please refer the manuscript for data generation protocol and analysis

Authors

  • M. Beckmann, Benedikt ;
  • Horos, Rastislav ;
  • Fischer, Bernd ;
  • Castello, Alfredo ;
  • Eichelbaum, Katrin ;
  • Alleaume, Anne-Marie ;
  • Schwarzl, Thomas ;
  • Curk, Tomaž ;
  • Foehr, Sophia ;
  • Huber, Wolfgang ;
  • Krijgsveld, Jeroen ;
  • W. Hentze, Matthias
0 Citations0 Mentions69% FAIR1.5 Dataset Index
10.5281/zenodo.14898747December 2015