Automated Author Profile

Fjellheim, Siri

Norwegian University of Life Sciences

Current S-Index

12.3

Sum of Dataset Indices for all datasets

Average Dataset Index per Dataset

1.8

Average Dataset Index per dataset

Total Datasets

7

Total datasets for this author

Average FAIR Score

77.5%

Average FAIR Score per dataset

Total Citations

10

Total citations to the author's datasets

Total Mentions

0

Total mentions of the author's datasets

S-Index Interpretation

S-Index Over Time

Cumulative Citations Over Time

Cumulative Mentions Over Time

Datasets

Data from: Drought tolerance as an evolutionary precursor to frost and winter tolerance in grasses (Version: 5)

Accumulating evidence is suggesting more frequent tropical-to-temperate transitions than previously thought. This raises the possibility that biome transitions could be facilitated by precursor traits. A wealth of ecological, genetic and physiological evidence suggests overlap between drought and frost stress responses, but the origin of this overlap, i.e. the evolution of these responses relative to each other, is poorly known. Here, we test whether adaptation to frost and/or severe winters in grasses (Poaceae) was facilitated by ancestral adaptation to drought. We used occurrence patterns across Köppen-Geiger climate zones to classify species as drought, frost and/or winter tolerant, followed by comparative analyses. Ancestral state reconstructions revealed different evolutionary trajectories in different clades, suggesting both drought-first and frost-first scenarios. Explicit simultaneous modelling of drought and frost/winter tolerance provided some support for correlated evolution, but suggested higher rates of gain of frost/winter tolerance in drought sensitive rather than drought tolerant lineages. Overall, there is limited support across grasses as a whole that drought tolerance acted as an evolutionary precursor to frost or severe winter tolerance. Different scenarios in different clades is consistent with present-day grasses being either cold or drought specialists, possibly as a consequence of trade-offs between different stress tolerance responses.

Authors

  • Schat, Laura ;
  • Schubert, Marian ;
  • Fjellheim, Siri ;
  • Humphreys, Aelys Muriel
2 Citations0 Mentions77% FAIR2.2 Dataset Index
10.5061/dryad.7wm37pw3s2025

Testing the chilling: Before drought-tolerance hypothesis in Pooideae grasses (Version: 8)

Temperate Pooideae are a large clade of economically important grasses distributed in some of the Earth’s coldest and driest terrestrial environments. Previous studies have inferred that Pooideae diversified from their tropical ancestors in a cold montane habitat, suggesting that above-freezing cold (chilling) tolerance evolved early in the subfamily. By contrast, drought tolerance is hypothesized to have evolved multiple times independently in response to global aridification that occurred after the split of Pooideae tribes. To independently test predictions of the chilling before-drought hypothesis in Pooideae, we assessed the conservation of whole plant and gene expression traits in response to chilling versus drought. We demonstrated that both trait responses are more similar across tribes in cold as compared to drought, suggesting that chilling responses evolved before, and drought responses after, tribe diversification. Moreover, we found significantly more overlap between drought and chilling-responsive genes within a species than between drought-responsive genes across species, providing evidence that chilling tolerance genes acted as precursors for the novel acquisition of increased drought tolerance multiple times independently, partially through the cooption of chilling responsive genes.

Authors

  • Das, Aayudh ;
  • Dedon, Natalie ;
  • Enders, Daniel ;
  • Fjellheim, Siri ;
  • Preston, Jill
2 Citations0 Mentions77% FAIR2.6 Dataset Index
10.5061/dryad.0k6djhb3r2022

Data from: A high-throughput FTIR spectroscopy approach to assess adaptive variation in the chemical composition of pollen (Version: 1)

The two factors defining male reproductive success in plants are pollen quantity and quality, but our knowledge about the importance of pollen quality is limited due to methodological constraints. Pollen quality in terms of chemical composition may be either genetically fixed for high performance independent of environmental conditions, or it may be plastic to maximize reproductive output under different environmental conditions. In this study, we validated a new approach for studying the role of chemical composition of pollen in adaptation to local climate. The approach is based on high-throughput Fourier infrared (FTIR) characterization and biochemical interpretation of pollen chemical composition in response to environmental conditions. The study covered three grass species, Poa alpina, Anthoxanthum odoratum, and Festuca ovina. For each species, plants were grown from seeds of three populations with wide geographic and climate variation. Each individual plant was divided into four genetically identical clones which were grown in different controlled environments (high and low levels of temperature and nutrients). In total, 389 samples were measured using a high-throughput FTIR spectrometer. The biochemical fingerprints of pollen were species and population specific, and plastic in response to different environmental conditions. The response was most pronounced for temperature, influencing the levels of proteins, lipids, and carbohydrates in pollen of all species. Furthermore, there is considerable variation in plasticity of the chemical composition of pollen among species and populations. The use of high-throughput FTIR spectroscopy provides fast, cheap, and simple assessment of the chemical composition of pollen. In combination with controlled-condition growth experiments and multivariate analyses, FTIR spectroscopy opens up for studies of the adaptive role of pollen that until now has been difficult with available methodology. The approach can easily be extended to other species and environmental conditions and has the potential to significantly increase our understanding of plant male function.

Authors

  • Zimmermann, Boris ;
  • Bağcıoğlu, Murat ;
  • Tafinstseva, Valeria ;
  • Kohler, Achim ;
  • Ohlson, Mikael ;
  • Fjellheim, Siri
1 Citation0 Mentions77% FAIR1.2 Dataset Index
10.5061/dryad.2mm712018

Data from: Population structure, genetic variation and linkage disequilibrium in perennial ryegrass populations divergently selected for freezing tolerance (Version: 1)

Low temperature is one of the abiotic stresses seriously affecting the growth of perennial ryegrass (Lolium perenne L. Understanding the genetic control of freezing tolerance would aid in the development of cultivars of perennial ryegrass with improved adaptation to frost. A total number of 80 individuals (24 of High frost [HF]; 29 of Low frost [LF] and 27 of Unselected [US]) from the second generation of the two divergently selected populations and an unselected control population were genotyped using 278 genome-wide SNPs derived from Lolium perenne L. transcriptome sequence. Our studies showed that the HF and LF populations are very divergent after selection for freezing tolerance, whereas the HF and US populations are more similar. Linkage disequilibrium (LD) decay varied across the seven chromosomes and the conspicuous pattern of LD between the HF and LF population confirmed their divergence in freezing tolerance. Furthermore, two Fst outlier methods; finite island model (fdist) by LOSITAN and hierarchical structure model using ARLEQUIN detected six loci under directional selection. These outlier loci are most probably linked to genes involved in freezing tolerance, cold adaptation and abiotic stress and might be the potential marker resources for breeding perennial ryegrass cultivars with improved freezing tolerance.

Authors

  • Kovi, Mallikarjuna Rao ;
  • Fjellheim, Siri ;
  • Sandve, Simen R. ;
  • Larsen, Arild ;
  • Rudi, Heidi ;
  • Asp, Torben ;
  • Kent, Matthew Peter ;
  • Rognli, Odd Arne
2 Citations0 Mentions77% FAIR2.3 Dataset Index
10.5061/dryad.sd1dt2016

Data from: Introduced Scotch broom (Cytisus scoparius) invades the genome of native populations in vulnerable heathland habitats (Version: 1)

Cytisus scoparius is a global invasive species that affects local flora and fauna at the intercontinental level. Its natural distribution spans across Europe, but seeds have also been moved among countries, mixing plants of native and non-native genetic origins. Hybridization between the introduced and native gene pool is likely to threaten both the native gene pool and the local flora. In this study, we address the potential threat of invasive C. scoparius to local gene pools in vulnerable heathlands. We used nuclear single nucleotide polymorphic (SNP) and simple sequence repeat (SSR) markers together with plastid SSR and indel markers to investigate the level and direction of gene flow between invasive and native heathland C. scoparius. Analyses of population structures confirmed the presence of two gene pools: one native and the other invasive. The nuclear genome of the native types was highly introgressed with the invasive genome, and we observed advanced-generation hybrids, suggesting that hybridization has been occurring for several generations. There is asymmetrical gene flow from the invasive to the native gene pool, which can be attributed to higher fecundity in the invasive individuals, measured by the number of flowers and seed pods. Strong spatial genetic structure in plastid markers and weaker structure in nuclear markers suggest that seeds spread over relatively short distances and that gene flow over longer distances is mainly facilitated by pollen dispersal. We further show that the growth habits of heathland plants become more vigorous with increased introgression from the invaders. Implications of the findings are discussed in relation to future management of invading C. scoparius.

Authors

  • Rostgaard Nielsen, Lene ;
  • Brandes, Ursula ;
  • Dahl Kjær, Erik ;
  • Fjellheim, Siri ;
  • Dahl Kjaer, Erik
1 Citation0 Mentions77% FAIR2.0 Dataset Index
10.5061/dryad.p49q02016

Data from: What's the meaning of local? Using molecular markers to define seed transfer zones for ecological restoration in Norway (Version: 1)

According to the Norwegian Diversity Act, practitioners of restoration in Norway are instructed to use seed mixtures of local provenance. However, there are no guidelines for how local seed should be selected. In this study, we use genetic variation in a set of alpine species (Agrostis mertensii, Avenella flexuosa, Carex bigelowii, Festuca ovina, Poa alpina and Scorzoneroides autumnalis) to define seed transfer zones to reduce confusion about the definition of ‘local seeds’. The species selected for the study are common in all parts of Norway and suitable for commercial seed production. The sampling covered the entire alpine region (7–20 populations per species, 3–15 individuals per population). We characterised genetic diversity using amplified fragment length polymorphisms. We identified different spatial genetic diversity structures in the species, most likely related to differences in reproductive strategies, phylogeographic factors and geographic distribution. Based on results from all species, we suggest four general seed transfer zones for alpine Norway. This is likely more conservative than needed for all species, given that no species show more than two genetic groups. Even so, the approach is practical as four seed mixtures will serve the need for restoration of vegetation in alpine regions in Norway.

Authors

  • Jørgensen, Marte Holten ;
  • Elameen, Abdelhameed ;
  • Hofman, Nadine ;
  • Klemsdal, Sonja ;
  • Malaval, Sandra ;
  • Fjellheim, Siri
1 Citation0 Mentions77% FAIR2.0 Dataset Index
10.5061/dryad.7q10s2016

Data from: Extremely low genetic variability and highly structured local populations of Arabidopsis thaliana at higher latitudes (Version: 1)

The genetic diversity and population structure of Arabidopsis thaliana populations from Norway were studied and compared to a worldwide sample of A. thaliana in order to investigate the demographic history and elucidate possible colonization routes of populations at the northernmost species limit. We genotyped 282 individuals from 31 local populations using 149 single nucleotide polymorphism (SNP) markers. A high level of population subdivision (FST = 0.85 ± 0.007) was found indicating that A. thaliana is highly structured at the regional level. Significant relationships between genetic and geographic distances were found, suggesting an isolation by distance mode of evolution. Genetic diversity was much lower and the level of linkage disequilibrium (LD) higher in populations from the north (65–68oN) compared to populations from the south (59–62oN); this is consistent with a northward expansion pattern. A neighbor-joining (NJ) tree showed that populations from northern Norway form a separate cluster, while the remaining populations are distributed over a few minor clusters. Minimal gene flow seems to have occurred between populations in different regions, especially between the geographically distant northern and southern populations. Our data suggest that northern populations represent a homogenous group that may have been established from a few founders during northward expansions, while populations in the central part of Norway constitute an admixed group established by founders of different origins, most probably as a result of human-mediated gene flow. Moreover, Norwegian populations appeared to be homogenous and isolated compared to a worldwide sample of A. thaliana, but they are still grouped with Swedish populations, which may indicate common colonization histories.

Authors

  • Lewandowska-Sabat, Anna Monika ;
  • Fjellheim, Siri ;
  • Rognli, Odd Arne
1 Citation0 Mentions81% FAIR0.7 Dataset Index
10.5061/dryad.19202010