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Automated Author Profile

Day, Philip J.

Current S-Index

5.6

Sum of Dataset Indices for all datasets

Average Dataset Index per Dataset

0.7

Average Dataset Index per dataset

Total Datasets

8

Total datasets for this author

Average FAIR Score

14.9%

Average FAIR Score per dataset

Total Citations

8

Total citations to the author's datasets

Total Mentions

0

Total mentions of the author's datasets

S-Index Interpretation

S-Index Over Time

Cumulative Citations Over Time

Cumulative Mentions Over Time

Datasets

Additional file 2 of MicroRNA and mRNA profiling in the idiopathic inflammatory myopathies

Additional file 2 Significant RNA sequencing differential expression in polymyositis, dermatomyositis and inclusion body myositis patients versus controls PM Polymyositis, DM Dermatomyositis, IBM Inclusion body myositis, Anti-Jo1 Subset of PM and DM with anti-Jo1 autoantibodies Data generated by DESeq2 analysis of RNA sequencing data from 7 PM, 7 DM, 5 IBM compared to 5 control whole blood samples. The table columns are gene ids, log2 fold change, standard error for log2 fold change (lfcSE), statistic value for the null hypothesis (stat), p-value, false discovery rate (padj), and gene name.

Authors

  • Parkes, Joanna E. ;
  • Thoma, Anastasia ;
  • Lightfoot, Adam P. ;
  • Day, Philip J. ;
  • Chinoy, Hector ;
  • Lamb, Janine A.
1 Citation0 Mentions15% FAIR0.7 Dataset Index
10.6084/m9.figshare.12457154January 2020

Additional file 2 of MicroRNA and mRNA profiling in the idiopathic inflammatory myopathies

Additional file 2 Significant RNA sequencing differential expression in polymyositis, dermatomyositis and inclusion body myositis patients versus controls PM Polymyositis, DM Dermatomyositis, IBM Inclusion body myositis, Anti-Jo1 Subset of PM and DM with anti-Jo1 autoantibodies Data generated by DESeq2 analysis of RNA sequencing data from 7 PM, 7 DM, 5 IBM compared to 5 control whole blood samples. The table columns are gene ids, log2 fold change, standard error for log2 fold change (lfcSE), statistic value for the null hypothesis (stat), p-value, false discovery rate (padj), and gene name.

Authors

  • Parkes, Joanna E. ;
  • Thoma, Anastasia ;
  • Lightfoot, Adam P. ;
  • Day, Philip J. ;
  • Chinoy, Hector ;
  • Lamb, Janine A.
1 Citation0 Mentions15% FAIR0.7 Dataset Index
10.6084/m9.figshare.12457154.v1January 2020

Additional file 3 of MicroRNA and mRNA profiling in the idiopathic inflammatory myopathies

Additional file 3 Significant microRNA sequencing differential expression in polymyositis, dermatomyositis and inclusion body myositis patients versus controls PM Polymyositis, DM Dermatomyositis, IBM Inclusion body myositis, Anti-Jo1 Subset of PM and DM with anti-Jo1 autoantibodies Data generated by DESeq2 analysis of small RNA sequencing data from 7 PM, 7 DM, 5 IBM compared to 5 control whole blood samples. The table columns are mature microRNA ids, log2 fold change, standard error for log2 fold change (lfcSE), statistic value for the null hypothesis (stat), p-value, false discovery rate (padj), and mature microRNA name.

Authors

  • Parkes, Joanna E. ;
  • Thoma, Anastasia ;
  • Lightfoot, Adam P. ;
  • Day, Philip J. ;
  • Chinoy, Hector ;
  • Lamb, Janine A.
1 Citation0 Mentions15% FAIR0.7 Dataset Index
10.6084/m9.figshare.12457157January 2020

Additional file 3 of MicroRNA and mRNA profiling in the idiopathic inflammatory myopathies

Additional file 3 Significant microRNA sequencing differential expression in polymyositis, dermatomyositis and inclusion body myositis patients versus controls PM Polymyositis, DM Dermatomyositis, IBM Inclusion body myositis, Anti-Jo1 Subset of PM and DM with anti-Jo1 autoantibodies Data generated by DESeq2 analysis of small RNA sequencing data from 7 PM, 7 DM, 5 IBM compared to 5 control whole blood samples. The table columns are mature microRNA ids, log2 fold change, standard error for log2 fold change (lfcSE), statistic value for the null hypothesis (stat), p-value, false discovery rate (padj), and mature microRNA name.

Authors

  • Parkes, Joanna E. ;
  • Thoma, Anastasia ;
  • Lightfoot, Adam P. ;
  • Day, Philip J. ;
  • Chinoy, Hector ;
  • Lamb, Janine A.
1 Citation0 Mentions15% FAIR0.7 Dataset Index
10.6084/m9.figshare.12457157.v1January 2020

Additional file 4 of MicroRNA and mRNA profiling in the idiopathic inflammatory myopathies

Additional file 4 GOseq analysis of differentially expressed genes in idiopathic inflammatory myopathy patients versus controls PM Polymyositis, DM Dermatomyositis, IBM Inclusion body myositis, Anti-Jo1 Subset of PM and DM with anti-Jo1 autoantibodies GOseq analysis was performed on significantly differentially expressed genes (FDR

Authors

  • Parkes, Joanna E. ;
  • Thoma, Anastasia ;
  • Lightfoot, Adam P. ;
  • Day, Philip J. ;
  • Chinoy, Hector ;
  • Lamb, Janine A.
1 Citation0 Mentions15% FAIR0.7 Dataset Index
10.6084/m9.figshare.12457160.v1January 2020

Additional file 4 of MicroRNA and mRNA profiling in the idiopathic inflammatory myopathies

Additional file 4 GOseq analysis of differentially expressed genes in idiopathic inflammatory myopathy patients versus controls PM Polymyositis, DM Dermatomyositis, IBM Inclusion body myositis, Anti-Jo1 Subset of PM and DM with anti-Jo1 autoantibodies GOseq analysis was performed on significantly differentially expressed genes (FDR

Authors

  • Parkes, Joanna E. ;
  • Thoma, Anastasia ;
  • Lightfoot, Adam P. ;
  • Day, Philip J. ;
  • Chinoy, Hector ;
  • Lamb, Janine A.
1 Citation0 Mentions15% FAIR0.7 Dataset Index
10.6084/m9.figshare.12457160January 2020

Additional file 5 of MicroRNA and mRNA profiling in the idiopathic inflammatory myopathies

Additional file 5 Canonical Pathways with an enrichment of significantly differentially expressed genes in idiopathic inflammatory myopathy patients PM Polymyositis, DM Dermatomyositis, IBM Inclusion body myositis, Anti-Jo1 Subset of PM and DM with anti-Jo1 autoantibodies QIAGEN’s Ingenuity Pathway Analysis (IPA) ‘Canonical Pathways’ analysis was performed on differential expression results from RNA sequencing of 7 PM and 7 DM (5 anti-Jo1 autoantibody positive), 5 IBM and 5 control whole blood samples. Columns are IPA defined canonical pathway, −log(p-value) for over-representation of dysregulated molecules in the pathway (> 1.3 is considered significant), ratio of dysregulated molecules to total molecules in pathway, activation score (z-score > 2 is significant predicted activation,

Authors

  • Parkes, Joanna E. ;
  • Thoma, Anastasia ;
  • Lightfoot, Adam P. ;
  • Day, Philip J. ;
  • Chinoy, Hector ;
  • Lamb, Janine A.
1 Citation0 Mentions13% FAIR0.7 Dataset Index
10.6084/m9.figshare.12457166.v1January 2020

Additional file 5 of MicroRNA and mRNA profiling in the idiopathic inflammatory myopathies

Additional file 5 Canonical Pathways with an enrichment of significantly differentially expressed genes in idiopathic inflammatory myopathy patients PM Polymyositis, DM Dermatomyositis, IBM Inclusion body myositis, Anti-Jo1 Subset of PM and DM with anti-Jo1 autoantibodies QIAGEN’s Ingenuity Pathway Analysis (IPA) ‘Canonical Pathways’ analysis was performed on differential expression results from RNA sequencing of 7 PM and 7 DM (5 anti-Jo1 autoantibody positive), 5 IBM and 5 control whole blood samples. Columns are IPA defined canonical pathway, −log(p-value) for over-representation of dysregulated molecules in the pathway (> 1.3 is considered significant), ratio of dysregulated molecules to total molecules in pathway, activation score (z-score > 2 is significant predicted activation,

Authors

  • Parkes, Joanna E. ;
  • Thoma, Anastasia ;
  • Lightfoot, Adam P. ;
  • Day, Philip J. ;
  • Chinoy, Hector ;
  • Lamb, Janine A.
1 Citation0 Mentions13% FAIR0.7 Dataset Index
10.6084/m9.figshare.12457166January 2020