Automated Author Profile

Pohjoismäki, Jaakko

0000-0002-1185-3610

Current S-Index

3.7

Sum of Dataset Indices for all datasets

Average Dataset Index per Dataset

0.6

Average Dataset Index per dataset

Total Datasets

6

Total datasets for this author

Average FAIR Score

22.8%

Average FAIR Score per dataset

Total Citations

4

Total citations to the author's datasets

Total Mentions

0

Total mentions of the author's datasets

S-Index Interpretation

S-Index Over Time

Cumulative Citations Over Time

Cumulative Mentions Over Time

Datasets

European Reference Genome Atlas Community - Phase 1 Members - 2020-2023 (Version: Version1-2023-06-27)

This dataset presents a comprehensive list of members registered as part of the European Reference Genome Atlas (ERGA, erga-biodiversity.eu) Community during ERGA Phase 1, which spanned from 2020 to 2023. The dataset includes information on the various roles undertaken by these members, particularly those who played a key role in establishing ERGA. Founding members are individuals who joined ERGA prior to the first leadership elections in February 2021, and they were instrumental in building the initial structure of ERGA. Some of these founding members were also involved in the establishment of different ERGA Committees. The dataset further includes details about the current and former core members and chairs of the ERGA committees. Additionally, it provides a list of the current (2023) and former Council members, along with the countries or regions they represent. The dataset is organised in alphabetical order for ease of reference. The co-authors of this dataset encompass both current and former ERGA Council members, listed in alphabetical order, and the current ERGA chair, as the last author.

Authors

  • ERGA Council ;
  • Aghayan, Sargis Aghasi ;
  • Alvarez, Nadir ;
  • Baldrian, Petr ;
  • Baltrunaite, Laima ;
  • Barta, Endre ;
  • Bista, Iliana ;
  • Böhne, Astrid ;
  • Bonisoli-Alquati, Andrea ;
  • Buzan, Elena ;
  • Čiampor Jr, Fedor ;
  • Ciofi, Claudio ;
  • Corominas, Montserrat ;
  • Djan, Mihajla ;
  • Fernández, Rosa ;
  • Feulner, Philine G D ;
  • Flouri, Tomas ;
  • Formenti, Giulio ;
  • Gissi, Carmela ;
  • Gregorič, Matjaž ;
  • Heinze, Berthold ;
  • Hindrikson, Maris ;
  • Höglund, Jacob ;
  • Hughes, Graham M ;
  • Klinga, Peter ;
  • Kratochwil, Claudius F ;
  • Kusza, Szilvia ;
  • Lucek, Kay ;
  • Magnússon, Kristinn Pétur ;
  • Manousaki, Tereza ;
  • Mc Cartney, Ann M ;
  • Melo-Ferreira, José ;
  • Mikalsen, Svein-Ole ;
  • Mouton, Alice ;
  • Nares, Vanesa Arroyo ;
  • Niell, Manel ;
  • Paez, Sadye ;
  • Palero, Ferran ;
  • Palinauskas, Vaidas ;
  • Palsbøll, Per Jakob ;
  • Pálsson, Snæbjörn ;
  • Pavlek, Martina ;
  • Pohjoismäki, Jaakko L. O. ;
  • Riesgo, Ana ;
  • Ruņģis, Dainis Edgars ;
  • Saarma, Urmas ;
  • Šķipars, Vilnis ;
  • Soares, André E.R. ;
  • Sousa, Vítor C ;
  • Ștefan, Andrei ;
  • Stefanovic, Milomir ;
  • Stiller, Josefin ;
  • Struck, Torsten Hugo ;
  • Svardal, Hannes ;
  • Theofanopoulou, Constantina ;
  • Urban, Lara ;
  • Velickovic, Nevena ;
  • Vella, Adriana ;
  • Vella, Noel ;
  • Vernes, Sonja C ;
  • Vinnere Pettersson, Olga ;
  • Waldvogel, Ann-Marie ;
  • Waterhouse, Robert ;
  • Weber, Alexandra Anh-Thu ;
  • Zagalska-Neubauer, Magdalena ;
  • Mazzoni, Camila J
1 Citation0 Mentions13% FAIR0.7 Dataset Index
10.5281/zenodo.8042449June 2023

European Reference Genome Atlas Community - Phase 1 Members - 2020-2023 (Version: Version1-2023-06-27)

This dataset presents a comprehensive list of members registered as part of the European Reference Genome Atlas (ERGA, erga-biodiversity.eu) Community during ERGA Phase 1, which spanned from 2020 to 2023. The dataset includes information on the various roles undertaken by these members, particularly those who played a key role in establishing ERGA. Founding members are individuals who joined ERGA prior to the first leadership elections in February 2021, and they were instrumental in building the initial structure of ERGA. Some of these founding members were also involved in the establishment of different ERGA Committees. The dataset further includes details about the current and former core members and chairs of the ERGA committees. Additionally, it provides a list of the current (2023) and former Council members, along with the countries or regions they represent. The dataset is organised in alphabetical order for ease of reference. The co-authors of this dataset encompass both current and former ERGA Council members, listed in alphabetical order, and the current ERGA chair, as the last author.

Authors

  • ERGA Council ;
  • Aghayan, Sargis Aghasi ;
  • Alvarez, Nadir ;
  • Baldrian, Petr ;
  • Baltrunaite, Laima ;
  • Barta, Endre ;
  • Bista, Iliana ;
  • Böhne, Astrid ;
  • Bonisoli-Alquati, Andrea ;
  • Buzan, Elena ;
  • Čiampor Jr, Fedor ;
  • Ciofi, Claudio ;
  • Corominas, Montserrat ;
  • Djan, Mihajla ;
  • Fernández, Rosa ;
  • Feulner, Philine G D ;
  • Flouri, Tomas ;
  • Formenti, Giulio ;
  • Gissi, Carmela ;
  • Gregorič, Matjaž ;
  • Heinze, Berthold ;
  • Hindrikson, Maris ;
  • Höglund, Jacob ;
  • Hughes, Graham M ;
  • Klinga, Peter ;
  • Kratochwil, Claudius F ;
  • Kusza, Szilvia ;
  • Lucek, Kay ;
  • Magnússon, Kristinn Pétur ;
  • Manousaki, Tereza ;
  • Mc Cartney, Ann M ;
  • Melo-Ferreira, José ;
  • Mikalsen, Svein-Ole ;
  • Mouton, Alice ;
  • Nares, Vanesa Arroyo ;
  • Niell, Manel ;
  • Paez, Sadye ;
  • Palero, Ferran ;
  • Palinauskas, Vaidas ;
  • Palsbøll, Per Jakob ;
  • Pálsson, Snæbjörn ;
  • Pavlek, Martina ;
  • Pohjoismäki, Jaakko L. O. ;
  • Riesgo, Ana ;
  • Ruņģis, Dainis Edgars ;
  • Saarma, Urmas ;
  • Šķipars, Vilnis ;
  • Soares, André E.R. ;
  • Sousa, Vítor C ;
  • Ștefan, Andrei ;
  • Stefanovic, Milomir ;
  • Stiller, Josefin ;
  • Struck, Torsten Hugo ;
  • Svardal, Hannes ;
  • Theofanopoulou, Constantina ;
  • Urban, Lara ;
  • Velickovic, Nevena ;
  • Vella, Adriana ;
  • Vella, Noel ;
  • Vernes, Sonja C ;
  • Vinnere Pettersson, Olga ;
  • Waldvogel, Ann-Marie ;
  • Waterhouse, Robert ;
  • Weber, Alexandra Anh-Thu ;
  • Zagalska-Neubauer, Magdalena ;
  • Mazzoni, Camila J
1 Citation0 Mentions13% FAIR0.7 Dataset Index
10.5281/zenodo.8083652June 2023

European Reference Genome Atlas Community - Phase 1 Members - 2020-2023 (Version: Version1-2023-06-15)

This dataset presents a comprehensive list of members registered as part of the European Reference Genome Atlas (ERGA, erga-biodiversity.eu) Community during ERGA Phase 1, which spanned from 2020 to 2023. The dataset includes information on the various roles undertaken by these members, particularly those who played a key role in establishing ERGA. Founding members are individuals who joined ERGA prior to the first leadership elections in February 2021, and they were instrumental in building the initial structure of ERGA. Some of these founding members were also involved in the establishment of different ERGA Committees. The dataset further includes details about the current and former core members and chairs of the ERGA committees. Additionally, it provides a list of the current (2023) and former Council members, along with the countries they represent. The dataset is organised in alphabetical order for ease of reference. The co-authors of this dataset encompass both current and former ERGA Council members, listed in alphabetical order, and the current ERGA chair, as the last author.

Authors

  • ERGA Council ;
  • Alvarez, Nadir ;
  • Baldrian, Petr ;
  • Baltrunaite, Laima ;
  • Barta, Endre ;
  • Bista, Iliana ;
  • Böhne, Astrid ;
  • Bonisoli-Alquati, Andrea ;
  • Buzan, Elena ;
  • Ciofi, Claudio ;
  • Djan, Mihajla ;
  • Fernández, Rosa ;
  • Feulner, Philine G D ;
  • Flouri, Tomas ;
  • Formenti, Giulio ;
  • Gregorič, Matjaž ;
  • Heinze, Berthold ;
  • Hindrikson, Maris ;
  • Höglund, Jacob ;
  • Hughes, Graham M ;
  • Klinga, Peter ;
  • Kratochwil, Claudius F ;
  • Kusza, Szilvia ;
  • Lucek, Kay ;
  • Magnússon, Kristinn Pétur ;
  • Mc Cartney, Ann M ;
  • Melo-Ferreira, José ;
  • Mikalsen, Svein-Ole ;
  • Mouton, Alice ;
  • Nares, Vanesa Arroyo ;
  • Niell, Manel ;
  • Paez, Sadye ;
  • Pálsson, Snæbjörn ;
  • Pavlek, Martina ;
  • Pohjoismäki, Jaakko L. O. ;
  • Riesgo, Ana ;
  • Ruņģis, Dainis Edgars ;
  • Saarma, Urmas ;
  • Šķipars, Vilnis ;
  • Soares, André E.R. ;
  • Ștefan, Andrei ;
  • Stefanovic, Milomir ;
  • Stiller, Josefin ;
  • Struck, Torsten Hugo ;
  • Svardal, Hannes ;
  • Theofanopoulou, Constantina ;
  • Urban, Lara ;
  • Velickovic, Nevena ;
  • Vella, Noel ;
  • Vernes, Sonja C ;
  • Vinnere Pettersson, Olga ;
  • Waldvogel, Ann-Marie ;
  • Waterhouse, Robert ;
  • Weber, Alexandra Anh-Thu ;
  • Zagalska-Neubauer, Magdalena ;
  • Mazzoni, Camila J
0 Citations0 Mentions13% FAIR0.3 Dataset Index
10.5281/zenodo.8042450June 2023

MinION sequencing data of mtDNA from BH10 cells (Version: 4)

Mitochondrial DNA (mtDNA) recombination in animals has remained enigmatic because of its uniparental inheritance and subsequent homoplasmic state, which excludes the biological need for genetic recombination, as well as limits tools to study it. However, molecular recombination is an important genome maintenance mechanism for all organisms, most notably being required for double-strand break repair. To demonstrate the existence of mtDNA recombination, we have taken advantage of a cell model with two different types of mitochondrial genomes and impaired ability to turn over broken mtDNA. The resulting excess of linear DNA fragments caused increased formation of cruciform mtDNA, appearance of heterodimeric mtDNA complexes and recombinant mtDNA genomes, detectable by Southern blot. Combining our observations with previously published work, we propose that the mitochondrial replisome can catalyze microhomology-mediated recombination of linear mtDNA ends, thus rendering a specialized mitochondrial recombinase unnecessary. The error-proneness of this system is likely to contribute to the formation of pathological mtDNA rearrangements.

Authors

  • Pohjoismäki, Jaakko
0 Citations0 Mentions69% FAIR0.7 Dataset Index
10.5061/dryad.f1vhhmh1pFebruary 2023

Additional file 1 of Variation in breeding practices and geographic isolation drive subpopulation differentiation, contributing to the loss of genetic diversity within dog breed lineages

Additional file 1.

Authors

  • Lampi, Sara ;
  • Donner, Jonas ;
  • Anderson, Heidi ;
  • Pohjoismäki, Jaakko
1 Citation0 Mentions13% FAIR0.7 Dataset Index
10.6084/m9.figshare.12457226January 2020

Additional file 1 of Variation in breeding practices and geographic isolation drive subpopulation differentiation, contributing to the loss of genetic diversity within dog breed lineages

Additional file 1.

Authors

  • Lampi, Sara ;
  • Donner, Jonas ;
  • Anderson, Heidi ;
  • Pohjoismäki, Jaakko
1 Citation0 Mentions13% FAIR0.7 Dataset Index
10.6084/m9.figshare.12457226.v1January 2020