Automated Author ProfileSlotte, Tanja
Slotte, Tanja
Current S-Index
Sum of Dataset Indices for all datasets
Average Dataset Index per Dataset
Average Dataset Index per dataset
Total Datasets
Total datasets for this author
Average FAIR Score
Average FAIR Score per dataset
Total Citations
Total citations to the author's datasets
Total Mentions
Total mentions of the author's datasets
S-Index Interpretation
The S-Index (Sharing Index) is a comprehensive metric that represents the cumulative impact of all your datasets. It is calculated as the sum of Dataset Index scores across all your claimed datasets.
What it means:
- A higher S-index indicates greater overall impact of your datasets relative to typical datasets in their fields of research
- The S-Index grows as you add more datasets or as existing datasets gain more citations and mentions
- It provides a single number to track your research data impact over time
Current S-Index: 10.2 (sum of 6 datasets Dataset Index scores)
More information here.
S-Index Over Time
Cumulative Citations Over Time
Cumulative Mentions Over Time
Datasets
<b>Abstract</b><br/>The Arctic is one of the most extreme terrestrial environments on the planet. Here we present the first complete genome assembly of a plant adapted to the high Arctic, Draba nivalis (Brassicaceae), an attractive model species for studying plant adaptation to the stresses imposed by this harsh environment. We used an iterative scaffolding strategy with data from short-reads, single-molecule long reads, proximity ligation data, and a genetic map to produce a 302 Mb assembly that is highly contiguous with 91.6% assembled into eight chromosomes (the base chromosome number). To identify candidate genes and gene families that may have facilitated adaptation to Arctic environmental stresses, we performed comparative genomic analyses with nine non-Arctic Brassicaceae species. We show that the D. nivalis genome contains expanded suites of genes associated with drought and cold stress (e.g. related to the maintenance of oxidation-reduction homeostasis, meiosis, and signaling pathways). The expansions of gene families associated with these functions appear to be driven in part by the activity of transposable elements. Tests of positive selection identify suites of candidate genes associated with meiosis and photoperiodism, as well as cold, drought, and oxidative stress responses. Our results reveal a multifaceted landscape of stress adaptation in the D. nivalis genome, offering avenues for the continued development of this species as an Arctic model plant.
Authors
- Nowak, Michael ;
- Birkeland, Siri ;
- Mandáková, Terezie ;
- Choudhury, Rimjhim Roy ;
- Guo, Xinyi ;
- Gustafsson, Lovisa ;
- Gizaw, Abel ;
- Schrøder-Nielsen, Audun ;
- Fracassetti, Marco ;
- Brysting, Anne ;
- Rieseberg, Loren ;
- Slotte, Tanja ;
- Parisod, Christian ;
- Lysak, Martin ;
- Brochmann, Christian
No description available
Authors
- Plue, Jan ;
- Kimberley, Adam ;
- Slotte, Tanja
No description available
Authors
- Plue, Jan ;
- Kimberley, Adam ;
- Slotte, Tanja
No description available
Authors
- Slotte, Tanja ;
- Hazzouri, Khaled Michel ;
- Stern, David L ;
- Andolfatto, Peter ;
- Wright, Stephen I.
No description available
Authors
- Slotte, Tanja ;
- Hazzouri, Khaled Michel ;
- Stern, David L ;
- Andolfatto, Peter ;
- Wright, Stephen I.