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Automated Author Profile

Daubenberger, Claudia

Swiss Tropical and Public Health InstituteUniversity of Basel

Current S-Index

8.7

Sum of Dataset Indices for all datasets

Average Dataset Index per Dataset

0.7

Average Dataset Index per dataset

Total Datasets

12

Total datasets for this author

Average FAIR Score

67.3%

Average FAIR Score per dataset

Total Citations

12

Total citations to the author's datasets

Total Mentions

0

Total mentions of the author's datasets

S-Index Interpretation

S-Index Over Time

Cumulative Citations Over Time

Cumulative Mentions Over Time

Datasets

Additional file 2 of Whole-genome sequence-informed MALDI-TOF MS diagnostics reveal importance of Klebsiella oxytoca group in invasive infections: a retrospective clinical study

Additional file 2: Table S1. Strains included in the study and where sequence data can be accessed.

Authors

  • Cuénod, Aline ;
  • Wüthrich, Daniel ;
  • Seth-Smith, Helena M. B. ;
  • Ott, Chantal ;
  • Gehringer, Christian ;
  • Foucault, Frédéric ;
  • Mouchet, Roxanne ;
  • Kassim, Ali ;
  • Revathi, Gunturu ;
  • Vogt, Deborah R. ;
  • von Felten, Stefanie ;
  • Bassetti, Stefano ;
  • Tschudin-Sutter, Sarah ;
  • Hettich, Timm ;
  • Schlotterbeck, Götz ;
  • Homberger, Christina ;
  • Casanova, Carlo ;
  • Moran-Gilad, Jacob ;
  • Sagi, Orli ;
  • Rodríguez-Sánchez, Belén ;
  • Müller, Franco ;
  • Aerni, Martina ;
  • Gaia, Valeria ;
  • van Dessel, Helke ;
  • Kampinga, Greetje A. ;
  • Müller, Claudia ;
  • Daubenberger, Claudia ;
  • Pflüger, Valentin ;
  • Egli, Adrian
1 Citation0 Mentions85% FAIR0.8 Dataset Index
10.6084/m9.figshare.166143442021

Additional file 2 of Whole-genome sequence-informed MALDI-TOF MS diagnostics reveal importance of Klebsiella oxytoca group in invasive infections: a retrospective clinical study

Additional file 2: Table S1. Strains included in the study and where sequence data can be accessed.

Authors

  • Cuénod, Aline ;
  • Wüthrich, Daniel ;
  • Seth-Smith, Helena M. B. ;
  • Ott, Chantal ;
  • Gehringer, Christian ;
  • Foucault, Frédéric ;
  • Mouchet, Roxanne ;
  • Kassim, Ali ;
  • Revathi, Gunturu ;
  • Vogt, Deborah R. ;
  • von Felten, Stefanie ;
  • Bassetti, Stefano ;
  • Tschudin-Sutter, Sarah ;
  • Hettich, Timm ;
  • Schlotterbeck, Götz ;
  • Homberger, Christina ;
  • Casanova, Carlo ;
  • Moran-Gilad, Jacob ;
  • Sagi, Orli ;
  • Rodríguez-Sánchez, Belén ;
  • Müller, Franco ;
  • Aerni, Martina ;
  • Gaia, Valeria ;
  • van Dessel, Helke ;
  • Kampinga, Greetje A. ;
  • Müller, Claudia ;
  • Daubenberger, Claudia ;
  • Pflüger, Valentin ;
  • Egli, Adrian
1 Citation0 Mentions85% FAIR0.8 Dataset Index
10.6084/m9.figshare.16614344.v12021

Additional file 4 of Whole-genome sequence-informed MALDI-TOF MS diagnostics reveal importance of Klebsiella oxytoca group in invasive infections: a retrospective clinical study

Additional file 4: Table S2. Cellular fatty acid composition of 11 Klebsiella spp. strains.

Authors

  • Cuénod, Aline ;
  • Wüthrich, Daniel ;
  • Seth-Smith, Helena M. B. ;
  • Ott, Chantal ;
  • Gehringer, Christian ;
  • Foucault, Frédéric ;
  • Mouchet, Roxanne ;
  • Kassim, Ali ;
  • Revathi, Gunturu ;
  • Vogt, Deborah R. ;
  • von Felten, Stefanie ;
  • Bassetti, Stefano ;
  • Tschudin-Sutter, Sarah ;
  • Hettich, Timm ;
  • Schlotterbeck, Götz ;
  • Homberger, Christina ;
  • Casanova, Carlo ;
  • Moran-Gilad, Jacob ;
  • Sagi, Orli ;
  • Rodríguez-Sánchez, Belén ;
  • Müller, Franco ;
  • Aerni, Martina ;
  • Gaia, Valeria ;
  • van Dessel, Helke ;
  • Kampinga, Greetje A. ;
  • Müller, Claudia ;
  • Daubenberger, Claudia ;
  • Pflüger, Valentin ;
  • Egli, Adrian
1 Citation0 Mentions85% FAIR0.8 Dataset Index
10.6084/m9.figshare.166143562021

Additional file 4 of Whole-genome sequence-informed MALDI-TOF MS diagnostics reveal importance of Klebsiella oxytoca group in invasive infections: a retrospective clinical study

Additional file 4: Table S2. Cellular fatty acid composition of 11 Klebsiella spp. strains.

Authors

  • Cuénod, Aline ;
  • Wüthrich, Daniel ;
  • Seth-Smith, Helena M. B. ;
  • Ott, Chantal ;
  • Gehringer, Christian ;
  • Foucault, Frédéric ;
  • Mouchet, Roxanne ;
  • Kassim, Ali ;
  • Revathi, Gunturu ;
  • Vogt, Deborah R. ;
  • von Felten, Stefanie ;
  • Bassetti, Stefano ;
  • Tschudin-Sutter, Sarah ;
  • Hettich, Timm ;
  • Schlotterbeck, Götz ;
  • Homberger, Christina ;
  • Casanova, Carlo ;
  • Moran-Gilad, Jacob ;
  • Sagi, Orli ;
  • Rodríguez-Sánchez, Belén ;
  • Müller, Franco ;
  • Aerni, Martina ;
  • Gaia, Valeria ;
  • van Dessel, Helke ;
  • Kampinga, Greetje A. ;
  • Müller, Claudia ;
  • Daubenberger, Claudia ;
  • Pflüger, Valentin ;
  • Egli, Adrian
1 Citation0 Mentions85% FAIR0.8 Dataset Index
10.6084/m9.figshare.16614356.v12021

Additional file 5 of Whole-genome sequence-informed MALDI-TOF MS diagnostics reveal importance of Klebsiella oxytoca group in invasive infections: a retrospective clinical study

Additional file 5: Table S3. Biochemical reaction and AMR profiles of a diverse set of Klebsiella spp. Strains.

Authors

  • Cuénod, Aline ;
  • Wüthrich, Daniel ;
  • Seth-Smith, Helena M. B. ;
  • Ott, Chantal ;
  • Gehringer, Christian ;
  • Foucault, Frédéric ;
  • Mouchet, Roxanne ;
  • Kassim, Ali ;
  • Revathi, Gunturu ;
  • Vogt, Deborah R. ;
  • von Felten, Stefanie ;
  • Bassetti, Stefano ;
  • Tschudin-Sutter, Sarah ;
  • Hettich, Timm ;
  • Schlotterbeck, Götz ;
  • Homberger, Christina ;
  • Casanova, Carlo ;
  • Moran-Gilad, Jacob ;
  • Sagi, Orli ;
  • Rodríguez-Sánchez, Belén ;
  • Müller, Franco ;
  • Aerni, Martina ;
  • Gaia, Valeria ;
  • van Dessel, Helke ;
  • Kampinga, Greetje A. ;
  • Müller, Claudia ;
  • Daubenberger, Claudia ;
  • Pflüger, Valentin ;
  • Egli, Adrian
1 Citation0 Mentions85% FAIR0.8 Dataset Index
10.6084/m9.figshare.166143622021

Additional file 5 of Whole-genome sequence-informed MALDI-TOF MS diagnostics reveal importance of Klebsiella oxytoca group in invasive infections: a retrospective clinical study

Additional file 5: Table S3. Biochemical reaction and AMR profiles of a diverse set of Klebsiella spp. Strains.

Authors

  • Cuénod, Aline ;
  • Wüthrich, Daniel ;
  • Seth-Smith, Helena M. B. ;
  • Ott, Chantal ;
  • Gehringer, Christian ;
  • Foucault, Frédéric ;
  • Mouchet, Roxanne ;
  • Kassim, Ali ;
  • Revathi, Gunturu ;
  • Vogt, Deborah R. ;
  • von Felten, Stefanie ;
  • Bassetti, Stefano ;
  • Tschudin-Sutter, Sarah ;
  • Hettich, Timm ;
  • Schlotterbeck, Götz ;
  • Homberger, Christina ;
  • Casanova, Carlo ;
  • Moran-Gilad, Jacob ;
  • Sagi, Orli ;
  • Rodríguez-Sánchez, Belén ;
  • Müller, Franco ;
  • Aerni, Martina ;
  • Gaia, Valeria ;
  • van Dessel, Helke ;
  • Kampinga, Greetje A. ;
  • Müller, Claudia ;
  • Daubenberger, Claudia ;
  • Pflüger, Valentin ;
  • Egli, Adrian
1 Citation0 Mentions85% FAIR0.8 Dataset Index
10.6084/m9.figshare.16614362.v12021

Additional file 6 of Whole-genome sequence-informed MALDI-TOF MS diagnostics reveal importance of Klebsiella oxytoca group in invasive infections: a retrospective clinical study

Additional file 6: Table S4. Reproducibility of detection for the predicted ribosomal subunits in MALDI-TOF mass spectra acquired in 4 different centers.

Authors

  • Cuénod, Aline ;
  • Wüthrich, Daniel ;
  • Seth-Smith, Helena M. B. ;
  • Ott, Chantal ;
  • Gehringer, Christian ;
  • Foucault, Frédéric ;
  • Mouchet, Roxanne ;
  • Kassim, Ali ;
  • Revathi, Gunturu ;
  • Vogt, Deborah R. ;
  • von Felten, Stefanie ;
  • Bassetti, Stefano ;
  • Tschudin-Sutter, Sarah ;
  • Hettich, Timm ;
  • Schlotterbeck, Götz ;
  • Homberger, Christina ;
  • Casanova, Carlo ;
  • Moran-Gilad, Jacob ;
  • Sagi, Orli ;
  • Rodríguez-Sánchez, Belén ;
  • Müller, Franco ;
  • Aerni, Martina ;
  • Gaia, Valeria ;
  • van Dessel, Helke ;
  • Kampinga, Greetje A. ;
  • Müller, Claudia ;
  • Daubenberger, Claudia ;
  • Pflüger, Valentin ;
  • Egli, Adrian
1 Citation0 Mentions85% FAIR0.8 Dataset Index
10.6084/m9.figshare.16614368.v12021

Additional file 6 of Whole-genome sequence-informed MALDI-TOF MS diagnostics reveal importance of Klebsiella oxytoca group in invasive infections: a retrospective clinical study

Additional file 6: Table S4. Reproducibility of detection for the predicted ribosomal subunits in MALDI-TOF mass spectra acquired in 4 different centers.

Authors

  • Cuénod, Aline ;
  • Wüthrich, Daniel ;
  • Seth-Smith, Helena M. B. ;
  • Ott, Chantal ;
  • Gehringer, Christian ;
  • Foucault, Frédéric ;
  • Mouchet, Roxanne ;
  • Kassim, Ali ;
  • Revathi, Gunturu ;
  • Vogt, Deborah R. ;
  • von Felten, Stefanie ;
  • Bassetti, Stefano ;
  • Tschudin-Sutter, Sarah ;
  • Hettich, Timm ;
  • Schlotterbeck, Götz ;
  • Homberger, Christina ;
  • Casanova, Carlo ;
  • Moran-Gilad, Jacob ;
  • Sagi, Orli ;
  • Rodríguez-Sánchez, Belén ;
  • Müller, Franco ;
  • Aerni, Martina ;
  • Gaia, Valeria ;
  • van Dessel, Helke ;
  • Kampinga, Greetje A. ;
  • Müller, Claudia ;
  • Daubenberger, Claudia ;
  • Pflüger, Valentin ;
  • Egli, Adrian
1 Citation0 Mentions85% FAIR0.8 Dataset Index
10.6084/m9.figshare.166143682021

Additional file 7 of Whole-genome sequence-informed MALDI-TOF MS diagnostics reveal importance of Klebsiella oxytoca group in invasive infections: a retrospective clinical study

Additional file 7: Table S5. Binary table displaying the predicted ribosomal subunits mass variants and whether this variant was predicted from an assembly or not.

Authors

  • Cuénod, Aline ;
  • Wüthrich, Daniel ;
  • Seth-Smith, Helena M. B. ;
  • Ott, Chantal ;
  • Gehringer, Christian ;
  • Foucault, Frédéric ;
  • Mouchet, Roxanne ;
  • Kassim, Ali ;
  • Revathi, Gunturu ;
  • Vogt, Deborah R. ;
  • von Felten, Stefanie ;
  • Bassetti, Stefano ;
  • Tschudin-Sutter, Sarah ;
  • Hettich, Timm ;
  • Schlotterbeck, Götz ;
  • Homberger, Christina ;
  • Casanova, Carlo ;
  • Moran-Gilad, Jacob ;
  • Sagi, Orli ;
  • Rodríguez-Sánchez, Belén ;
  • Müller, Franco ;
  • Aerni, Martina ;
  • Gaia, Valeria ;
  • van Dessel, Helke ;
  • Kampinga, Greetje A. ;
  • Müller, Claudia ;
  • Daubenberger, Claudia ;
  • Pflüger, Valentin ;
  • Egli, Adrian
1 Citation0 Mentions85% FAIR0.8 Dataset Index
10.6084/m9.figshare.166143742021

Additional file 7 of Whole-genome sequence-informed MALDI-TOF MS diagnostics reveal importance of Klebsiella oxytoca group in invasive infections: a retrospective clinical study

Additional file 7: Table S5. Binary table displaying the predicted ribosomal subunits mass variants and whether this variant was predicted from an assembly or not.

Authors

  • Cuénod, Aline ;
  • Wüthrich, Daniel ;
  • Seth-Smith, Helena M. B. ;
  • Ott, Chantal ;
  • Gehringer, Christian ;
  • Foucault, Frédéric ;
  • Mouchet, Roxanne ;
  • Kassim, Ali ;
  • Revathi, Gunturu ;
  • Vogt, Deborah R. ;
  • von Felten, Stefanie ;
  • Bassetti, Stefano ;
  • Tschudin-Sutter, Sarah ;
  • Hettich, Timm ;
  • Schlotterbeck, Götz ;
  • Homberger, Christina ;
  • Casanova, Carlo ;
  • Moran-Gilad, Jacob ;
  • Sagi, Orli ;
  • Rodríguez-Sánchez, Belén ;
  • Müller, Franco ;
  • Aerni, Martina ;
  • Gaia, Valeria ;
  • van Dessel, Helke ;
  • Kampinga, Greetje A. ;
  • Müller, Claudia ;
  • Daubenberger, Claudia ;
  • Pflüger, Valentin ;
  • Egli, Adrian
1 Citation0 Mentions15% FAIR0.4 Dataset Index
10.6084/m9.figshare.16614374.v12021