Automated Author ProfileSubramanyam, Subhashree
Agricultural Research Service0000-0003-0979-6300
Subramanyam, Subhashree
Current S-Index
Sum of Dataset Indices for all datasets
Average Dataset Index per Dataset
Average Dataset Index per dataset
Total Datasets
Total datasets for this author
Average FAIR Score
Average FAIR Score per dataset
Total Citations
Total citations to the author's datasets
Total Mentions
Total mentions of the author's datasets
S-Index Interpretation
The S-Index (Sharing Index) is a comprehensive metric that represents the cumulative impact of all your datasets. It is calculated as the sum of Dataset Index scores across all your claimed datasets.
What it means:
- A higher S-index indicates greater overall impact of your datasets relative to typical datasets in their fields of research
- The S-Index grows as you add more datasets or as existing datasets gain more citations and mentions
- It provides a single number to track your research data impact over time
Current S-Index: 1.7 (sum of 1 dataset Dataset Index scores)
More information here.
S-Index Over Time
Cumulative Citations Over Time
Cumulative Mentions Over Time
Datasets
This dataset consists of configuration files and results files involved in developing and testing SLAG, an iterative Perl pipeline to construct local assemblies seeded on query sequences. SLAG is intended for situations where a full genome assembly is economically or technically infeasible, and thus it emphasizes methods that can deal with shallow read depth. SLAG and its user-runnable test suite have been deposited at https://github.com/cfcrane/SLAG. This Dryad repository contains files that were used in preparing a manuscript, "SLAG: A Program for Seeded Local Assembly of Genes in Complex Genomes", which has been submitted to Molecular Ecology Resources. The repository is divided into sections for scripts, simulated reads, real reads, and benchmarking against two functionally similar programs, aTRAM2 and SRAssembler.
Authors
- Crane, Charles ;
- Williams, Christie ;
- Nemacheck, Jill ;
- Subramanyam, Subhashree ;
- Goodwin, Stephen