Automated Author Profile

Wei, Fan

Current S-Index

4.1

Sum of Dataset Indices for all datasets

Average Dataset Index per Dataset

0.4

Average Dataset Index per dataset

Total Datasets

10

Total datasets for this author

Average FAIR Score

84.6%

Average FAIR Score per dataset

Total Citations

8

Total citations to the author's datasets

Total Mentions

0

Total mentions of the author's datasets

S-Index Interpretation

S-Index Over Time

Cumulative Citations Over Time

Cumulative Mentions Over Time

Datasets

Complete chloroplast genome and phylogenetic analysis of <i>Lonicera microphylla</i> Willd. ex Roem. &amp; Schult. 1819 Caprifoliaceae

Lonicera microphylla Willd. ex Roem. & Schult. 1819 is a medicinal plant species, especially for treating chronic fever and dysentery. This study aimed to characterize the chloroplast genome of L. microphylla and reconstruct the phylogenetic relationships among Lonicera Linn. 1753. The circular complete chloroplast genome is 154,945 bp in length, with two inverted repeat regions (IRs; 23,841 bp), separated by a small single-copy region (SSC; 18,789 bp) and a large single-copy region (LSC; 88,474 bp). The overall GC content of L. microphylla plastome was 38.36%. The chloroplast genome encoded a total of 131 genes, including 84 protein-coding genes, 39 tRNA genes, and eight rRNA genes. Phylogenetic analysis reveals that L. microphylla was more closely related to Lonicera tangutica Maxim. 1878. Our result can provide reference for the phylogenetic relationship, resource development, and utilization of Lonicera.

Authors

  • Wei, Xiaomei ;
  • Hu, Ying ;
  • Huang, Baoyou ;
  • Peng, Yude ;
  • Zhu, Yanxia ;
  • Wei, Fan
1 Citation0 Mentions85% FAIR0.5 Dataset Index
10.6084/m9.figshare.276789932024

Complete chloroplast genome and phylogenetic analysis of <i>Lonicera microphylla</i> Willd. ex Roem. &amp; Schult. 1819 Caprifoliaceae

Lonicera microphylla Willd. ex Roem. & Schult. 1819 is a medicinal plant species, especially for treating chronic fever and dysentery. This study aimed to characterize the chloroplast genome of L. microphylla and reconstruct the phylogenetic relationships among Lonicera Linn. 1753. The circular complete chloroplast genome is 154,945 bp in length, with two inverted repeat regions (IRs; 23,841 bp), separated by a small single-copy region (SSC; 18,789 bp) and a large single-copy region (LSC; 88,474 bp). The overall GC content of L. microphylla plastome was 38.36%. The chloroplast genome encoded a total of 131 genes, including 84 protein-coding genes, 39 tRNA genes, and eight rRNA genes. Phylogenetic analysis reveals that L. microphylla was more closely related to Lonicera tangutica Maxim. 1878. Our result can provide reference for the phylogenetic relationship, resource development, and utilization of Lonicera.

Authors

  • Wei, Xiaomei ;
  • Hu, Ying ;
  • Huang, Baoyou ;
  • Peng, Yude ;
  • Zhu, Yanxia ;
  • Wei, Fan
1 Citation0 Mentions85% FAIR0.5 Dataset Index
10.6084/m9.figshare.27678993.v12024

Additional file 1 of Transcriptome and proteome analyses reveal the potential mechanism of seed dormancy release in Amomum tsaoko during warm stratification

Additional file1: Table S1. Data information of A.tsaoko transcriptome. Table S2. The differentially expressed genes shared in three comparison. Table S3. The differentially expressed genes involved in signal transduction pathways. Table S4. The detailed information of DEPs. Table S5. Gene ontology term assignments for the DEPs. Table S6. The detailed information of proteins correlated with transcripts. Table S7. qRT-PCR analysis of 50 DEGs. Table S8. qRT-PCR primers for candidate genes.

Authors

  • Pan, Chunliu ;
  • Yao, Lixiang ;
  • Yu, Liying ;
  • Qiao, Zhu ;
  • Tang, Meiqiong ;
  • Wei, Fan ;
  • Huang, Xueyan ;
  • Zhou, Yunyi
0 Citations0 Mentions85% FAIR0.1 Dataset Index
10.6084/m9.figshare.226065462023

Additional file 1 of Transcriptome and proteome analyses reveal the potential mechanism of seed dormancy release in Amomum tsaoko during warm stratification

Additional file1: Table S1. Data information of A.tsaoko transcriptome. Table S2. The differentially expressed genes shared in three comparison. Table S3. The differentially expressed genes involved in signal transduction pathways. Table S4. The detailed information of DEPs. Table S5. Gene ontology term assignments for the DEPs. Table S6. The detailed information of proteins correlated with transcripts. Table S7. qRT-PCR analysis of 50 DEGs. Table S8. qRT-PCR primers for candidate genes.

Authors

  • Pan, Chunliu ;
  • Yao, Lixiang ;
  • Yu, Liying ;
  • Qiao, Zhu ;
  • Tang, Meiqiong ;
  • Wei, Fan ;
  • Huang, Xueyan ;
  • Zhou, Yunyi
0 Citations0 Mentions85% FAIR0.1 Dataset Index
10.6084/m9.figshare.22606546.v12023

Additional file 6 of Integrated transcriptome and small RNA sequencing analyses reveal a drought stress response network in Sophora tonkinensis

Additional file 6: Table S3. Known and novel miRNAs identified in the study.

Authors

  • Liang, Ying ;
  • Wei, Kunhua ;
  • Wei, Fan ;
  • Qin, Shuangshuang ;
  • Deng, Chuanhua ;
  • Lin, Yang ;
  • Li, Mingjie ;
  • Gu, Li ;
  • Wei, Guili ;
  • Miao, Jianhua ;
  • Zhang, Zhongyi
1 Citation0 Mentions85% FAIR0.5 Dataset Index
10.6084/m9.figshare.171201832021

Additional file 4 of Integrated transcriptome and small RNA sequencing analyses reveal a drought stress response network in Sophora tonkinensis

Additional file 4: Table S1. Primers used for qRT-PCR.

Authors

  • Liang, Ying ;
  • Wei, Kunhua ;
  • Wei, Fan ;
  • Qin, Shuangshuang ;
  • Deng, Chuanhua ;
  • Lin, Yang ;
  • Li, Mingjie ;
  • Gu, Li ;
  • Wei, Guili ;
  • Miao, Jianhua ;
  • Zhang, Zhongyi
1 Citation0 Mentions85% FAIR0.5 Dataset Index
10.6084/m9.figshare.171201712021

Additional file 6 of Integrated transcriptome and small RNA sequencing analyses reveal a drought stress response network in Sophora tonkinensis

Additional file 6: Table S3. Known and novel miRNAs identified in the study.

Authors

  • Liang, Ying ;
  • Wei, Kunhua ;
  • Wei, Fan ;
  • Qin, Shuangshuang ;
  • Deng, Chuanhua ;
  • Lin, Yang ;
  • Li, Mingjie ;
  • Gu, Li ;
  • Wei, Guili ;
  • Miao, Jianhua ;
  • Zhang, Zhongyi
1 Citation0 Mentions85% FAIR0.5 Dataset Index
10.6084/m9.figshare.17120183.v12021

Additional file 4 of Integrated transcriptome and small RNA sequencing analyses reveal a drought stress response network in Sophora tonkinensis

Additional file 4: Table S1. Primers used for qRT-PCR.

Authors

  • Liang, Ying ;
  • Wei, Kunhua ;
  • Wei, Fan ;
  • Qin, Shuangshuang ;
  • Deng, Chuanhua ;
  • Lin, Yang ;
  • Li, Mingjie ;
  • Gu, Li ;
  • Wei, Guili ;
  • Miao, Jianhua ;
  • Zhang, Zhongyi
1 Citation0 Mentions85% FAIR0.5 Dataset Index
10.6084/m9.figshare.17120171.v12021

Additional file 5 of Integrated transcriptome and small RNA sequencing analyses reveal a drought stress response network in Sophora tonkinensis

Additional file 5: Table S2. Differentially regulated genes in CK vs. MDT and CK vs. SDT.

Authors

  • Liang, Ying ;
  • Wei, Kunhua ;
  • Wei, Fan ;
  • Qin, Shuangshuang ;
  • Deng, Chuanhua ;
  • Lin, Yang ;
  • Li, Mingjie ;
  • Gu, Li ;
  • Wei, Guili ;
  • Miao, Jianhua ;
  • Zhang, Zhongyi
1 Citation0 Mentions85% FAIR0.5 Dataset Index
10.6084/m9.figshare.171201742021

Additional file 5 of Integrated transcriptome and small RNA sequencing analyses reveal a drought stress response network in Sophora tonkinensis

Additional file 5: Table S2. Differentially regulated genes in CK vs. MDT and CK vs. SDT.

Authors

  • Liang, Ying ;
  • Wei, Kunhua ;
  • Wei, Fan ;
  • Qin, Shuangshuang ;
  • Deng, Chuanhua ;
  • Lin, Yang ;
  • Li, Mingjie ;
  • Gu, Li ;
  • Wei, Guili ;
  • Miao, Jianhua ;
  • Zhang, Zhongyi
1 Citation0 Mentions85% FAIR0.5 Dataset Index
10.6084/m9.figshare.17120174.v12021