Automated Author Profile

Kudláček, Tomáš

Mendel University in Brno

Current S-Index

4.3

Sum of Dataset Indices for all datasets

Average Dataset Index per Dataset

2.1

Average Dataset Index per dataset

Total Datasets

2

Total datasets for this author

Average FAIR Score

73.1%

Average FAIR Score per dataset

Total Citations

2

Total citations to the author's datasets

Total Mentions

0

Total mentions of the author's datasets

S-Index Interpretation

S-Index Over Time

Cumulative Citations Over Time

Cumulative Mentions Over Time

Datasets

Phylogenetic data for: Synchrospora gen. nov., a new Peronosporaceae genus with aerial lifestyle from a natural cloud forest in Panama (Version: 5)

During a survey of Phytophthora diversity in Panama, fast-growing oomycete isolates were obtained from naturally fallen leaves of an unidentified tree species in a tropical cloud forest. Phylogenetic analyses of sequences from the nuclear ITS, LSU and ß–tubulin loci and the mitochondrial cox1 and cox2 genes revealed they belong to a new species of a new genus, officially described here as Synchrospora gen. nov., which resided as a basal genus within the Peronosporaceae. The type species S. medusiformis has unique morphological characters. The sporangiophores show determinate growth, multifurcating at the end forming a stunted, candelabra-like apex from which multiple (8 to >100) long, curved pedicels are growing simultaneously in a medusa-like way. The caducous papillate sporangia mature and are shed synchronously. The breeding system is homothallic, hence more inbreeding than outcrossing, with smooth-walled oogonia, plerotic oospores and paragynous antheridia. Optimum and maximum temperatures for growth are 22.5 and 25–27.5 °C, consistent with its natural cloud forest habitat. It is concluded that S. medusiformis is adapted to a lifestyle as canopy-dwelling leaf pathogen in tropical cloud forests. More oomycete surveys in the canopies of tropical rainforests and cloud forests are needed to elucidate the diversity and role of oomycetes and, in particular, S. medusiformis and possibly other Synchrospora taxa in this as yet under-explored habitat.

Authors

  • Jung, Thomas ;
  • Balci, Yilmaz ;
  • Kirk Broders, Kirk ;
  • Milenković, Ivan ;
  • Janoušek, Josef ;
  • Kudláček, Tomáš ;
  • Đorđević, Biljana ;
  • Horta Jung, Marília
1 Citation0 Mentions77% FAIR2.2 Dataset Index
10.5061/dryad.p2ngf1vvtApril 2023

Phylogenetic data for: High diversity of new and known Phytophthora species from phylogenetic Clade 10 in natural ecosystems of Asia, Europe and the Americas (Version: 7)

During extensive surveys of Phytophthora diversity, 14 new species were detected in natural ecosystems in Chile, Louisiana, Sweden, Ukraine, Vietnam and Indonesia. Multigene phylogeny based on the nuclear LSU, rpl10, ITS, ßtub, enl, hsp90, tef-1α, ras-ypt1 and tigA and the mitochondrial cox1, nadh1 and rps10 gene sequences demonstrated that they belong to phylogenetic Clade 10 which is structured into three subclades. Subclades 10a and 10b comprise soil- and waterborne species with nonpapillate sporangia and variable breeding systems, including the known P. afrocarpa, P. gallica and P. intercalaris and the new P. ludoviciana, P. procera, P. pseudogallica, P. scandinavica, P. subarctica, P. tenuimura, P. tonkinensis and P. ukrainensis. In contrast, all species in Subclade 10c are airborne with papillate sporangia and homothallic breeding system, including the known P. boehmeriae, P. kernoviae and P. morindae and the new P. celebensis, P. chilensis, P. javanensis, P. multiglobulosa, P. pseudochilensis and P. pseudokernoviae. All new species differed from each other and from related species by a unique combination of morphological characters, the breeding system, cardinal temperatures and growth rates. The biogeography and evolutionary history of Clade 10 are discussed and the hypothesis put forward that the extant subclades originate from early divergences of pre-Gondwanan ancestors (>175 Mya) into water-/soilborne and airborne lineages which during their global spread experienced multiple allopatric and sympatric radiations.

Authors

  • Jung, Thomas ;
  • Milenković, Ivan ;
  • Corcobado, Tamara ;
  • Májek, Tomáš ;
  • Janoušek, Josef ;
  • Kudláček, Tomáš ;
  • Tomšovský, Michal ;
  • Nagy, Zoltán ;
  • Durán, Álvaro ;
  • Tarigan, Marthin ;
  • Sanfuentes von Stowasser, Eugenio ;
  • Singh, Raghuwinder ;
  • Ferreira, Monique ;
  • Webber, Joan ;
  • Scanu, Bruno ;
  • Chi, Nguyen Minh ;
  • Thu, Pham Quang ;
  • Junaid, Muhammad ;
  • Rosmana, Ade ;
  • Baharuddin, Baharuddin ;
  • Kuswinanti, Tutik ;
  • Nasri, Nasri ;
  • Kageyama, Koji ;
  • Hieno, Ayaka ;
  • Masuya, Hayato ;
  • Uematsu, Seiji ;
  • Oliva, Jonàs ;
  • Redondo, Miguel ;
  • Maia, Cristiana ;
  • Matsiakh, Iryna ;
  • Kramarets, Volodymyr ;
  • O’Hanlon, Richard ;
  • Tomić, Željko ;
  • Brasier, Clive ;
  • Horta Jung, Marília
1 Citation0 Mentions69% FAIR2.0 Dataset Index
10.5061/dryad.41ns1rngwAugust 2022