Automated Author Profile

Álvarez, Julio

Complutense University of Madrid

Current S-Index

1.3

Sum of Dataset Indices for all datasets

Average Dataset Index per Dataset

0.6

Average Dataset Index per dataset

Total Datasets

2

Total datasets for this author

Average FAIR Score

49.0%

Average FAIR Score per dataset

Total Citations

0

Total citations to the author's datasets

Total Mentions

0

Total mentions of the author's datasets

S-Index Interpretation

S-Index Over Time

Cumulative Citations Over Time

Cumulative Mentions Over Time

Datasets

Additional file 2 of Genome-wide association reveals host-specific genomic traits in Escherichia coli

Additional file 2: Table S1. Metadata of 1,198 E. coli isolates. Table S2. Genes and genetic variants associated with different hosts that came as significant by both k-mer based as well as pan-genome based GWAS. Table S3. Prevalence of ompP, arlC and ompT in different STs in the RefSeq collection (n=17,994) and in our collection of E. coli isolates (n=1198). Table S4. Prevalence of the iroBCDEN gene cluster in sequence types and associated hosts. Details are shown for sequence types (STs) with at least ten isolates harboring iroBCDEN. Table S5. Genomes from our dataset used for annotating host-associated k-mers.

Authors

  • Tiwari, Sumeet K. ;
  • van der Putten, Boas C. L. ;
  • Fuchs, Thilo M. ;
  • Vinh, Trung N. ;
  • Bootsma, Martin ;
  • Oldenkamp, Rik ;
  • La Ragione, Roberto ;
  • Matamoros, Sebastien ;
  • Hoa, Ngo T. ;
  • Berens, Christian ;
  • Leng, Joy ;
  • Álvarez, Julio ;
  • Ferrandis-Vila, Marta ;
  • Ritchie, Jenny M. ;
  • Fruth, Angelika ;
  • Schwarz, Stefan ;
  • Domínguez, Lucas ;
  • Ugarte-Ruiz, María ;
  • Bethe, Astrid ;
  • Huber, Charlotte ;
  • Johanns, Vanessa ;
  • Stamm, Ivonne ;
  • Wieler, Lothar H. ;
  • Ewers, Christa ;
  • Fivian-Hughes, Amanda ;
  • Schmidt, Herbert ;
  • Menge, Christian ;
  • Semmler, Torsten ;
  • Schultsz, Constance
0 Citations0 Mentions85% FAIR0.9 Dataset Index
10.6084/m9.figshare.22618688.v1January 2023

Additional file 2 of Genome-wide association reveals host-specific genomic traits in Escherichia coli

Additional file 2: Table S1. Metadata of 1,198 E. coli isolates. Table S2. Genes and genetic variants associated with different hosts that came as significant by both k-mer based as well as pan-genome based GWAS. Table S3. Prevalence of ompP, arlC and ompT in different STs in the RefSeq collection (n=17,994) and in our collection of E. coli isolates (n=1198). Table S4. Prevalence of the iroBCDEN gene cluster in sequence types and associated hosts. Details are shown for sequence types (STs) with at least ten isolates harboring iroBCDEN. Table S5. Genomes from our dataset used for annotating host-associated k-mers.

Authors

  • Tiwari, Sumeet K. ;
  • van der Putten, Boas C. L. ;
  • Fuchs, Thilo M. ;
  • Vinh, Trung N. ;
  • Bootsma, Martin ;
  • Oldenkamp, Rik ;
  • La Ragione, Roberto ;
  • Matamoros, Sebastien ;
  • Hoa, Ngo T. ;
  • Berens, Christian ;
  • Leng, Joy ;
  • Álvarez, Julio ;
  • Ferrandis-Vila, Marta ;
  • Ritchie, Jenny M. ;
  • Fruth, Angelika ;
  • Schwarz, Stefan ;
  • Domínguez, Lucas ;
  • Ugarte-Ruiz, María ;
  • Bethe, Astrid ;
  • Huber, Charlotte ;
  • Johanns, Vanessa ;
  • Stamm, Ivonne ;
  • Wieler, Lothar H. ;
  • Ewers, Christa ;
  • Fivian-Hughes, Amanda ;
  • Schmidt, Herbert ;
  • Menge, Christian ;
  • Semmler, Torsten ;
  • Schultsz, Constance
0 Citations0 Mentions13% FAIR0.3 Dataset Index
10.6084/m9.figshare.22618688January 2023