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Automated Author Profile

Karlsson, Niclas G.

University of Gothenburg

Current S-Index

0.1

Sum of Dataset Indices for all datasets

Average Dataset Index per Dataset

0.1

Average Dataset Index per dataset

Total Datasets

1

Total datasets for this author

Average FAIR Score

13.5%

Average FAIR Score per dataset

Total Citations

0

Total citations to the author's datasets

Total Mentions

0

Total mentions of the author's datasets

S-Index Interpretation

S-Index Over Time

Cumulative Citations Over Time

Cumulative Mentions Over Time

Datasets

Predicting glycan structure from tandem mass spectrometry via deep learning

Curated set of LC-MS/MS data from glycomics studies. Used for training and applying CandyCrunch, a deep learning model to predict glycan structure from LC-MS/MS data, described in Urban et al., bioRxiv, 2023 and https://github.com/BojarLab/CandyCrunch. Files: full_dataset.xlsx: Full dataset with all annotated LC-MS/MS glycan spectra X_train.pkl: spectra and metadata from our training set y_train.pkl: labels from our training set X_test.pkl: spectra and metadata from our independent test set y_test.pkl: labels from our independent test set

Authors

  • Urban, James ;
  • Chunsheng, Jin ;
  • Thomsson, Kristina A. ;
  • Karlsson, Niclas G. ;
  • Ives, Callum M. ;
  • Fadda, Elisa ;
  • Bojar, Daniel
0 Citations0 Mentions13% FAIR0.1 Dataset Index
10.5281/zenodo.7940047January 2023