Automated Author Profile

Mackall, Crystal

Stanford Medicine

Current S-Index

0.7

Sum of Dataset Indices for all datasets

Average Dataset Index per Dataset

0.4

Average Dataset Index per dataset

Total Datasets

2

Total datasets for this author

Average FAIR Score

65.4%

Average FAIR Score per dataset

Total Citations

0

Total citations to the author's datasets

Total Mentions

0

Total mentions of the author's datasets

S-Index Interpretation

S-Index Over Time

Cumulative Citations Over Time

Cumulative Mentions Over Time

Datasets

The CCR6–CCL20 axis promotes regulatory T cell glycolysis and immunosuppression in tumors

Data accompanying the manuscript "The CCR6–CCL20 axis promotes regulatory T cell glycolysis and immunosuppression in tumors"-- includes RNA-Seq of sorted murine Tregs from WT and Ccr6 KO mice. The experiment was designed to compare transcriptomic differences between WT and Ccr6 KO Tregs during activation. WT and Ccr6 KO Tregs, cells were isolated from mice and cultured in vitro for 3 days with activation using anti-CD3/CD28 beads. Total RNA was extracted using the Trizol method. Quantity and quality were assessed using a Thermo Scientific™ NanoDrop™ 2000/2000c Spectrophotometer. Novogene Corporation Inc prepared the RNA-seq 250-300 bp insert cDNA library. Illumina HiSeq platform PE150 sequencing was used for sequencing, yielding 20M raw reads/sample. Mus Musculus mm39 was used as the reference genome for alignment.

Authors

  • Pant, Ayush ;
  • Jain, Aanchal ;
  • Chen, Yiyun ;
  • Patel, Kisha ;
  • Saleh, Laura ;
  • Tzeng, Stephany ;
  • Nitta, Ryan ;
  • Zhao, Liang ;
  • Wu, Caren ;
  • Bederson, Maria ;
  • Wang, William ;
  • Bergsneider, Brandon ;
  • Choi, John ;
  • Medikonda, Ravi ;
  • Verma, Rohit ;
  • Cho, Kwang ;
  • Kim, Lily ;
  • Kim, Jennifer ;
  • Yazigi, Eli ;
  • Lee, Si Yeon ;
  • Rajendran, Sakthi ;
  • Rajappa, Prajwal ;
  • Mackall, Crystal ;
  • Li, Gordon ;
  • Tyler, Betty ;
  • Brem, Henry ;
  • Pardoll, Drew ;
  • Lim, Michael ;
  • Jackson, Christopher
0 Citations0 Mentions65% FAIR0.4 Dataset Index
10.17632/9g2grrwm4m2024

The CCR6–CCL20 axis promotes regulatory T cell glycolysis and immunosuppression in tumors

Data accompanying the manuscript "The CCR6–CCL20 axis promotes regulatory T cell glycolysis and immunosuppression in tumors"-- includes RNA-Seq of sorted murine Tregs from WT and Ccr6 KO mice. The experiment was designed to compare transcriptomic differences between WT and Ccr6 KO Tregs during activation. WT and Ccr6 KO Tregs, cells were isolated from mice and cultured in vitro for 3 days with activation using anti-CD3/CD28 beads. Total RNA was extracted using the Trizol method. Quantity and quality were assessed using a Thermo Scientific™ NanoDrop™ 2000/2000c Spectrophotometer. Novogene Corporation Inc prepared the RNA-seq 250-300 bp insert cDNA library. Illumina HiSeq platform PE150 sequencing was used for sequencing, yielding 20M raw reads/sample. Mus Musculus mm39 was used as the reference genome for alignment.

Authors

  • Pardoll, Drew ;
  • Lim, Michael ;
  • Jackson, Christopher ;
  • Pant, Ayush ;
  • Jain, Aanchal ;
  • Chen, Yiyun ;
  • Patel, Kisha ;
  • Saleh, Laura ;
  • Tzeng, Stephany ;
  • Nitta, Ryan ;
  • Zhao, Liang ;
  • Wu, Caren ;
  • Bederson, Maria ;
  • Wang, William ;
  • Bergsneider, Brandon ;
  • Choi, John ;
  • Medikonda, Ravi ;
  • Verma, Rohit ;
  • Cho, Kwang ;
  • Kim, Lily ;
  • Kim, Jennifer ;
  • Yazigi, Eli ;
  • Lee, Si Yeon ;
  • Rajendran, Sakthi ;
  • Rajappa, Prajwal ;
  • Mackall, Crystal ;
  • Li, Gordon ;
  • Tyler, Betty ;
  • Brem, Henry
0 Citations0 Mentions65% FAIR0.3 Dataset Index
10.17632/9g2grrwm4m.12024