Automated Author ProfileRath, Subha Narayan
Indian Institute of Technology Hyderabad0000-0002-3414-2328
Rath, Subha Narayan
Current S-Index
Sum of Dataset Indices for all datasets
Average Dataset Index per Dataset
Average Dataset Index per dataset
Total Datasets
Total datasets for this author
Average FAIR Score
Average FAIR Score per dataset
Total Citations
Total citations to the author's datasets
Total Mentions
Total mentions of the author's datasets
S-Index Interpretation
The S-Index (Sharing Index) is a comprehensive metric that represents the cumulative impact of all your datasets. It is calculated as the sum of Dataset Index scores across all your claimed datasets.
What it means:
- A higher S-index indicates greater overall impact of your datasets relative to typical datasets in their fields of research
- The S-Index grows as you add more datasets or as existing datasets gain more citations and mentions
- It provides a single number to track your research data impact over time
Current S-Index: 5.2 (sum of 10 datasets Dataset Index scores)
More information here.
S-Index Over Time
Cumulative Citations Over Time
Cumulative Mentions Over Time
Datasets
Additional file 1: Table S1. Data statistics of five Bos indicus de novo pseudohaplotype assemblies. Table S2. NUI occurrence matrix from NUI discovery pipeline. Table S3. NUI breakpoints in the UOA_Brahman_1 reference genome overlapping with B. taurus introgressed segments. Table S4. NUI in common with published pangenomes. Table S5. Transcriptome read mapping (%) to reference vs. pangenome. Table S6. Comparison of top gene expression under heat stress as reported by Sajjanar et al. (2023) and identified in the pangenome. Table S7. BLASTx results of NUI novel genes against the NCBI non-redundant (nr) chordata database. Table S8. BICIs occurrence matrix. Table S9. Overall repeat content in BICIs. Table S10. BICIs annotation in genic and non-genic region. Table S11. BICIs supported by transcript. Table S12. BICIs supported by AUGUSTUS and transcript. Table S13. Assembly accessions ID. Table S14. WGS accessions included in the study. Table S15. Transcriptome accessions included in the study.
Authors
- Azam, Sarwar ;
- Sahu, Abhisek ;
- Pandey, Naveen Kumar ;
- Neupane, Mahesh ;
- Van Tassell, Curtis P ;
- Rosen, Benjamin D ;
- Gandham, Ravi Kumar ;
- Rath, Subha Narayan ;
- Majumdar, Subeer S
Additional file 1: Table S1. Data statistics of five Bos indicus de novo pseudohaplotype assemblies. Table S2. NUI occurrence matrix from NUI discovery pipeline. Table S3. NUI breakpoints in the UOA_Brahman_1 reference genome overlapping with B. taurus introgressed segments. Table S4. NUI in common with published pangenomes. Table S5. Transcriptome read mapping (%) to reference vs. pangenome. Table S6. Comparison of top gene expression under heat stress as reported by Sajjanar et al. (2023) and identified in the pangenome. Table S7. BLASTx results of NUI novel genes against the NCBI non-redundant (nr) chordata database. Table S8. BICIs occurrence matrix. Table S9. Overall repeat content in BICIs. Table S10. BICIs annotation in genic and non-genic region. Table S11. BICIs supported by transcript. Table S12. BICIs supported by AUGUSTUS and transcript. Table S13. Assembly accessions ID. Table S14. WGS accessions included in the study. Table S15. Transcriptome accessions included in the study.
Authors
- Azam, Sarwar ;
- Sahu, Abhisek ;
- Pandey, Naveen Kumar ;
- Neupane, Mahesh ;
- Van Tassell, Curtis P ;
- Rosen, Benjamin D ;
- Gandham, Ravi Kumar ;
- Rath, Subha Narayan ;
- Majumdar, Subeer S
Additional file 3: NUI discovery pipeline fasta file.
Authors
- Azam, Sarwar ;
- Sahu, Abhisek ;
- Pandey, Naveen Kumar ;
- Neupane, Mahesh ;
- Van Tassell, Curtis P ;
- Rosen, Benjamin D ;
- Gandham, Ravi Kumar ;
- Rath, Subha Narayan ;
- Majumdar, Subeer S
Additional file 3: NUI discovery pipeline fasta file.
Authors
- Azam, Sarwar ;
- Sahu, Abhisek ;
- Pandey, Naveen Kumar ;
- Neupane, Mahesh ;
- Van Tassell, Curtis P ;
- Rosen, Benjamin D ;
- Gandham, Ravi Kumar ;
- Rath, Subha Narayan ;
- Majumdar, Subeer S
Additional file 4: Minigraph pipeline fasta file.
Authors
- Azam, Sarwar ;
- Sahu, Abhisek ;
- Pandey, Naveen Kumar ;
- Neupane, Mahesh ;
- Van Tassell, Curtis P ;
- Rosen, Benjamin D ;
- Gandham, Ravi Kumar ;
- Rath, Subha Narayan ;
- Majumdar, Subeer S
Additional file 4: Minigraph pipeline fasta file.
Authors
- Azam, Sarwar ;
- Sahu, Abhisek ;
- Pandey, Naveen Kumar ;
- Neupane, Mahesh ;
- Van Tassell, Curtis P ;
- Rosen, Benjamin D ;
- Gandham, Ravi Kumar ;
- Rath, Subha Narayan ;
- Majumdar, Subeer S
Additional file 5: Final NUI set fasta file.
Authors
- Azam, Sarwar ;
- Sahu, Abhisek ;
- Pandey, Naveen Kumar ;
- Neupane, Mahesh ;
- Van Tassell, Curtis P ;
- Rosen, Benjamin D ;
- Gandham, Ravi Kumar ;
- Rath, Subha Narayan ;
- Majumdar, Subeer S
Additional file 5: Final NUI set fasta file.
Authors
- Azam, Sarwar ;
- Sahu, Abhisek ;
- Pandey, Naveen Kumar ;
- Neupane, Mahesh ;
- Van Tassell, Curtis P ;
- Rosen, Benjamin D ;
- Gandham, Ravi Kumar ;
- Rath, Subha Narayan ;
- Majumdar, Subeer S
Additional file 6: BICI fasta file.
Authors
- Azam, Sarwar ;
- Sahu, Abhisek ;
- Pandey, Naveen Kumar ;
- Neupane, Mahesh ;
- Van Tassell, Curtis P ;
- Rosen, Benjamin D ;
- Gandham, Ravi Kumar ;
- Rath, Subha Narayan ;
- Majumdar, Subeer S
Additional file 6: BICI fasta file.
Authors
- Azam, Sarwar ;
- Sahu, Abhisek ;
- Pandey, Naveen Kumar ;
- Neupane, Mahesh ;
- Van Tassell, Curtis P ;
- Rosen, Benjamin D ;
- Gandham, Ravi Kumar ;
- Rath, Subha Narayan ;
- Majumdar, Subeer S