Automated Author Profile

Anderson, Gary

University of Manitoba
0000-0002-0427-8216

Current S-Index

1.0

Sum of Dataset Indices for all datasets

Average Dataset Index per Dataset

0.5

Average Dataset Index per dataset

Total Datasets

2

Total datasets for this author

Average FAIR Score

76.9%

Average FAIR Score per dataset

Total Citations

0

Total citations to the author's datasets

Total Mentions

0

Total mentions of the author's datasets

S-Index Interpretation

S-Index Over Time

Cumulative Citations Over Time

Cumulative Mentions Over Time

Datasets

Lake Sturgeon Genome and Annotation (Version: 1.0)

This is the genome and functional annotation for the lake sturgeon (Acipenser fulvescens). The individual used was a female from northern Manitoba, who also provided gametes for conservation supplementation. Blood was sampled for DNA. Genome assembly was completed with HiFi and HiC reads. Genome annotation was completed with short read RNAseq data, IsoSeq data, and protein data from vertebrates and the sterlet genome. RNAseq data was from tissue-specific lake sturgeon transcriptomes (Thorstensen et al., 2023), while IsoSeq data was from n=8 larval lake sturgeon in an experiment where half were exposed to CTmax and half were sampled haphazardly from holding tanks where gill and liver were dissected. BRAKER and StringTie were used for structural annotations, while functional annotations were done with InterProScan, UniProt Swiss-Prot, and UniRef 100 databases.

Authors

  • Thorstensen, Matt ;
  • Schreier, Andrea ;
  • Anderson, Gary
0 Citations0 Mentions77% FAIR0.5 Dataset Index
10.5281/zenodo.173412792025

Lake Sturgeon Genome and Annotation (Version: 1.0)

This is the genome and functional annotation for the lake sturgeon (Acipenser fulvescens). The individual used was a female from northern Manitoba, who also provided gametes for conservation supplementation. Blood was sampled for DNA. Genome assembly was completed with HiFi and HiC reads. Genome annotation was completed with short read RNAseq data, IsoSeq data, and protein data from vertebrates and the sterlet genome. RNAseq data was from tissue-specific lake sturgeon transcriptomes (Thorstensen et al., 2023), while IsoSeq data was from n=8 larval lake sturgeon in an experiment where half were exposed to CTmax and half were sampled haphazardly from holding tanks where gill and liver were dissected. BRAKER and StringTie were used for structural annotations, while functional annotations were done with InterProScan, UniProt Swiss-Prot, and UniRef 100 databases.

Authors

  • Thorstensen, Matt ;
  • Schreier, Andrea ;
  • Anderson, Gary
0 Citations0 Mentions77% FAIR0.5 Dataset Index
10.5281/zenodo.173412802025