Automated Author Profile

Tak, Ka Hee

Current S-Index

8.5

Sum of Dataset Indices for all datasets

Average Dataset Index per Dataset

1.4

Average Dataset Index per dataset

Total Datasets

6

Total datasets for this author

Average FAIR Score

88.5%

Average FAIR Score per dataset

Total Citations

19

Total citations to the author's datasets

Total Mentions

0

Total mentions of the author's datasets

S-Index Interpretation

S-Index Over Time

Cumulative Citations Over Time

Cumulative Mentions Over Time

Datasets

Detailed clinical characteristics of 99 Korean colorectal cancer sample

We performed whole-genome sequencing (WGS) on 99 Korean patients with early- and late-onset colorectal cancer (CRC). This dataset provides a comprehensive summary of the clinical information associated with these individuals. The abstract for our paper is as follows: Colorectal cancer (CRC) is the third most prevalent cancer type worldwide. Despite improvements in screening programs, the incidence of early-onset CRC (EOCRC) in patients under 50 years old is rapidly increasing, including in Korea, in contrast to the decreasing trend of late-onset CRC (LOCRC). However, a comprehensive biological understanding of CRC’s coding and non-coding variants, onset-dependent prognostic variables, and the genetic and transcriptomic differences between EOCRC and LOCRC remains limited. To provide insights into this, we present a high-quality multi-omics dataset consisting of whole genome sequencing (WGS) and RNA sequencing (RNA-seq) data from 49 EOCRC and 50 LOCRC patients. WGS was performed using the DNBSEQ-T7 platform, generating 1.409 billion reads at an average depth of 37.70×. RNA-seq data previously generated from the same samples are included to support integrative analysis. This dataset enables comprehensive exploration of genomic and transcriptomic alterations in CRC and serves as a valuable resource for identifying onset-specific biomarkers and molecular features, ultimately supporting improved diagnosis and therapeutic strategies.

Authors

  • Kim, Jae-Yoon ;
  • Jin Ha, Ye ;
  • Park, Seung-Jin ;
  • Lee, Sun-Woo ;
  • Kim, Seon-Yeop ;
  • Oh, Seung-Eun ;
  • Park, Jong-Lyul ;
  • Tak, Ka Hee ;
  • Sik Yoon, Yong ;
  • Lyul Lee, Jong ;
  • Kim, Seon-Young ;
  • Kim, Chan Wook
4 Citations0 Mentions88% FAIR1.9 Dataset Index
10.6084/m9.figshare.308455672025

Detailed clinical characteristics of 99 Korean colorectal cancer sample (Version: 1)

We performed whole-genome sequencing (WGS) on 99 Korean patients with early- and late-onset colorectal cancer (CRC). This dataset provides a comprehensive summary of the clinical information associated with these individuals. The abstract for our paper is as follows: Colorectal cancer (CRC) is the third most prevalent cancer type worldwide. Despite improvements in screening programs, the incidence of early-onset CRC (EOCRC) in patients under 50 years old is rapidly increasing, including in Korea, in contrast to the decreasing trend of late-onset CRC (LOCRC). However, a comprehensive biological understanding of CRC’s coding and non-coding variants, onset-dependent prognostic variables, and the genetic and transcriptomic differences between EOCRC and LOCRC remains limited. To provide insights into this, we present a high-quality multi-omics dataset consisting of whole genome sequencing (WGS) and RNA sequencing (RNA-seq) data from 49 EOCRC and 50 LOCRC patients. WGS was performed using the DNBSEQ-T7 platform, generating 1.409 billion reads at an average depth of 37.70×. RNA-seq data previously generated from the same samples are included to support integrative analysis. This dataset enables comprehensive exploration of genomic and transcriptomic alterations in CRC and serves as a valuable resource for identifying onset-specific biomarkers and molecular features, ultimately supporting improved diagnosis and therapeutic strategies.

Authors

  • Kim, Jae-Yoon ;
  • Jin Ha, Ye ;
  • Park, Seung-Jin ;
  • Lee, Sun-Woo ;
  • Kim, Seon-Yeop ;
  • Oh, Seung-Eun ;
  • Park, Jong-Lyul ;
  • Tak, Ka Hee ;
  • Sik Yoon, Yong ;
  • Lyul Lee, Jong ;
  • Kim, Seon-Young ;
  • Kim, Chan Wook
3 Citations0 Mentions88% FAIR1.5 Dataset Index
10.6084/m9.figshare.30845567.v12025

Accession numbers, mapping statistics, and matched RNA accession numbers for 99 Korean CRC whole-genome samples

We performed whole-genome sequencing (WGS) on 99 Korean patients with early- and late-onset colorectal cancer (CRC). This dataset provides the accession numbers, mapping statistics, and matched RNA accession numbers for the deposited whole-genome data of these 99 patients. The abstract of our paper is as follows: Colorectal cancer (CRC) is the third most prevalent cancer type worldwide. Despite improvements in screening programs, the incidence of early-onset CRC (EOCRC) in patients under 50 years old is rapidly increasing, including in Korea, in contrast to the decreasing trend of late-onset CRC (LOCRC). However, a comprehensive biological understanding of CRC’s coding and non-coding variants, onset-dependent prognostic variables, and the genetic and transcriptomic differences between EOCRC and LOCRC remains limited. To provide insights into this, we present a high-quality multi-omics dataset consisting of whole genome sequencing (WGS) and RNA sequencing (RNA-seq) data from 49 EOCRC and 50 LOCRC patients. WGS was performed using the DNBSEQ-T7 platform, generating 1.409 billion reads at an average depth of 37.70×. RNA-seq data previously generated from the same samples are included to support integrative analysis. This dataset enables comprehensive exploration of genomic and transcriptomic alterations in CRC and serves as a valuable resource for identifying onset-specific biomarkers and molecular features, ultimately supporting improved diagnosis and therapeutic strategies.

Authors

  • Kim, Jae-Yoon ;
  • Jin Ha, Ye ;
  • Park, Seung-Jin ;
  • Lee, Sun-Woo ;
  • Kim, Seon-Yeop ;
  • Oh, Seung-Eun ;
  • Park, Jong-Lyul ;
  • Tak, Ka Hee ;
  • Sik Yoon, Yong ;
  • Lyul Lee, Jong ;
  • Kim, Seon-Young ;
  • Kim, Chan Wook
4 Citations0 Mentions88% FAIR2.0 Dataset Index
10.6084/m9.figshare.308455702025

Accession numbers, mapping statistics, and matched RNA accession numbers for 99 Korean CRC whole-genome samples (Version: 1)

We performed whole-genome sequencing (WGS) on 99 Korean patients with early- and late-onset colorectal cancer (CRC). This dataset provides the accession numbers, mapping statistics, and matched RNA accession numbers for the deposited whole-genome data of these 99 patients. The abstract of our paper is as follows: Colorectal cancer (CRC) is the third most prevalent cancer type worldwide. Despite improvements in screening programs, the incidence of early-onset CRC (EOCRC) in patients under 50 years old is rapidly increasing, including in Korea, in contrast to the decreasing trend of late-onset CRC (LOCRC). However, a comprehensive biological understanding of CRC’s coding and non-coding variants, onset-dependent prognostic variables, and the genetic and transcriptomic differences between EOCRC and LOCRC remains limited. To provide insights into this, we present a high-quality multi-omics dataset consisting of whole genome sequencing (WGS) and RNA sequencing (RNA-seq) data from 49 EOCRC and 50 LOCRC patients. WGS was performed using the DNBSEQ-T7 platform, generating 1.409 billion reads at an average depth of 37.70×. RNA-seq data previously generated from the same samples are included to support integrative analysis. This dataset enables comprehensive exploration of genomic and transcriptomic alterations in CRC and serves as a valuable resource for identifying onset-specific biomarkers and molecular features, ultimately supporting improved diagnosis and therapeutic strategies.

Authors

  • Kim, Jae-Yoon ;
  • Jin Ha, Ye ;
  • Park, Seung-Jin ;
  • Lee, Sun-Woo ;
  • Kim, Seon-Yeop ;
  • Oh, Seung-Eun ;
  • Park, Jong-Lyul ;
  • Tak, Ka Hee ;
  • Sik Yoon, Yong ;
  • Lyul Lee, Jong ;
  • Kim, Seon-Young ;
  • Kim, Chan Wook
3 Citations0 Mentions88% FAIR1.5 Dataset Index
10.6084/m9.figshare.30845570.v12025

RNA-seq raw expression values for early-onset and late-onset types in 99 Korean colorectal cancer individuals

We performed whole-genome sequencing (WGS) on 99 Korean patients with early- and late-onset colorectal cancer (CRC). This dataset provides the raw expression values for the matched RNA-seq data (previously generated by us) corresponding to these 99 patients. The abstract for our paper is as follows: Colorectal cancer (CRC) is the third most prevalent cancer type worldwide. Despite improvements in screening programs, the incidence of early-onset CRC (EOCRC) in patients under 50 years old is rapidly increasing, including in Korea, in contrast to the decreasing trend of late-onset CRC (LOCRC). However, a comprehensive biological understanding of CRC’s coding and non-coding variants, onset-dependent prognostic variables, and the genetic and transcriptomic differences between EOCRC and LOCRC remains limited. To provide insights into this, we present a high-quality multi-omics dataset consisting of whole genome sequencing (WGS) and RNA sequencing (RNA-seq) data from 49 EOCRC and 50 LOCRC patients. WGS was performed using the DNBSEQ-T7 platform, generating 1.409 billion reads at an average depth of 37.70×. RNA-seq data previously generated from the same samples are included to support integrative analysis. This dataset enables comprehensive exploration of genomic and transcriptomic alterations in CRC and serves as a valuable resource for identifying onset-specific biomarkers and molecular features, ultimately supporting improved diagnosis and therapeutic strategies.

Authors

  • Kim, Jae-Yoon ;
  • Jin Ha, Ye ;
  • Park, Seung-Jin ;
  • Lee, Sun-Woo ;
  • Kim, Seon-Yeop ;
  • Oh, Seung-Eun ;
  • Park, Jong-Lyul ;
  • Tak, Ka Hee ;
  • Sik Yoon, Yong ;
  • Lyul Lee, Jong ;
  • Kim, Seon-Young ;
  • Kim, Chan Wook
3 Citations0 Mentions88% FAIR1.6 Dataset Index
10.6084/m9.figshare.308468152025

RNA-seq raw expression values for early-onset and late-onset types in 99 Korean colorectal cancer individuals (Version: 1)

We performed whole-genome sequencing (WGS) on 99 Korean patients with early- and late-onset colorectal cancer (CRC). This dataset provides the raw expression values for the matched RNA-seq data (previously generated by us) corresponding to these 99 patients. The abstract for our paper is as follows: Colorectal cancer (CRC) is the third most prevalent cancer type worldwide. Despite improvements in screening programs, the incidence of early-onset CRC (EOCRC) in patients under 50 years old is rapidly increasing, including in Korea, in contrast to the decreasing trend of late-onset CRC (LOCRC). However, a comprehensive biological understanding of CRC’s coding and non-coding variants, onset-dependent prognostic variables, and the genetic and transcriptomic differences between EOCRC and LOCRC remains limited. To provide insights into this, we present a high-quality multi-omics dataset consisting of whole genome sequencing (WGS) and RNA sequencing (RNA-seq) data from 49 EOCRC and 50 LOCRC patients. WGS was performed using the DNBSEQ-T7 platform, generating 1.409 billion reads at an average depth of 37.70×. RNA-seq data previously generated from the same samples are included to support integrative analysis. This dataset enables comprehensive exploration of genomic and transcriptomic alterations in CRC and serves as a valuable resource for identifying onset-specific biomarkers and molecular features, ultimately supporting improved diagnosis and therapeutic strategies.

Authors

  • Kim, Jae-Yoon ;
  • Jin Ha, Ye ;
  • Park, Seung-Jin ;
  • Lee, Sun-Woo ;
  • Kim, Seon-Yeop ;
  • Oh, Seung-Eun ;
  • Park, Jong-Lyul ;
  • Tak, Ka Hee ;
  • Sik Yoon, Yong ;
  • Lyul Lee, Jong ;
  • Kim, Seon-Young ;
  • Kim, Chan Wook
2 Citations0 Mentions88% FAIR1.2 Dataset Index
10.6084/m9.figshare.30846815.v12025