Automated Author Profile

Zhou, Xianming

Current S-Index

0.0

Sum of Dataset Indices for all datasets

Average Dataset Index per Dataset

0.0

Average Dataset Index per dataset

Total Datasets

2

Total datasets for this author

Average FAIR Score

88.5%

Average FAIR Score per dataset

Total Citations

0

Total citations to the author's datasets

Total Mentions

0

Total mentions of the author's datasets

S-Index Interpretation

S-Index Over Time

Cumulative Citations Over Time

Cumulative Mentions Over Time

Datasets

Pipelines for selecting conditional cores and iterative genomic prediction for manuscript: Development of Conditional Cores Via Super Saturated Designs for Genetic Diversity-Based Prediction Models

Genetic diversity is fundamental to sustainable crop improvement. This study uses 1,755 recombinant inbred lines from the SoyNAM population that were phenotyped for yield across nine environments to explore how training core composition based on genetic diversity affects the predictive ability of genomic selection models. Using supersaturated designs (SSDs), we quantified population diversity and generated training populations that were optimized conditionally for fixed test sets. We deployed two alternative strategies, one that maximizes and one that minimizes genetic diversity between training and test populations. Our results show that maximizing genetic diversity improves prediction accuracy compared to a random baseline in simple GBLUP models. However, this advantage disappears when explicit family pedigree information is available. We also found that maximizing genetic diversity preserves at least one individual from as many different families as possible, while minimizing diversity eliminates or overrepresentes them.

Authors

  • Jarquin, Diego ;
  • Garcia-Abadillo, Julian ;
  • Zhou, Xianming
0 Citations0 Mentions88% FAIR0.5 Dataset Index
10.6084/m9.figshare.313546302026

Pipelines for selecting conditional cores and iterative genomic prediction for manuscript: Development of Conditional Cores Via Super Saturated Designs for Genetic Diversity-Based Prediction Models (Version: 1)

Genetic diversity is fundamental to sustainable crop improvement. This study uses 1,755 recombinant inbred lines from the SoyNAM population that were phenotyped for yield across nine environments to explore how training core composition based on genetic diversity affects the predictive ability of genomic selection models. Using supersaturated designs (SSDs), we quantified population diversity and generated training populations that were optimized conditionally for fixed test sets. We deployed two alternative strategies, one that maximizes and one that minimizes genetic diversity between training and test populations. Our results show that maximizing genetic diversity improves prediction accuracy compared to a random baseline in simple GBLUP models. However, this advantage disappears when explicit family pedigree information is available. We also found that maximizing genetic diversity preserves at least one individual from as many different families as possible, while minimizing diversity eliminates or overrepresentes them.

Authors

  • Jarquin, Diego ;
  • Garcia-Abadillo, Julian ;
  • Zhou, Xianming
0 Citations0 Mentions88% FAIR0.5 Dataset Index
10.6084/m9.figshare.31354630.v12026