Automated Author Profile

O'Meara, Brian

0000-0002-0337-5997

Current S-Index

20.0

Sum of Dataset Indices for all datasets

Average Dataset Index per Dataset

1.1

Average Dataset Index per dataset

Total Datasets

18

Total datasets for this author

Average FAIR Score

46.9%

Average FAIR Score per dataset

Total Citations

2

Total citations to the author's datasets

Total Mentions

0

Total mentions of the author's datasets

S-Index Interpretation

S-Index Over Time

Cumulative Citations Over Time

Cumulative Mentions Over Time

Datasets

Identifying climatic drivers of hybridization with a new ancestral niche reconstruction method (Version: 7)

Applications of molecular phylogenetic approaches have uncovered evidence of hybridization across numerous clades of life, yet the environmental factors responsible for driving opportunities for hybridization remain obscure. Verbal models implicating geographic range shifts that brought species together during the Pleistocene have often been invoked, but quantitative tests using paleoclimatic data are needed to validate these models. Here, we produce a phylogeny for Heuchereae, a clade of 15 genera and 83 species in Saxifragaceae, with complete sampling of recognized species, using 277 nuclear loci and nearly complete chloroplast genomes. We then employ an improved framework with a coalescent simulation approach to test and confirm previous hybridization hypotheses and identify one new intergeneric hybridization event. Focusing on the North American distribution of Heuchereae, we introduce and implement a newly developed approach to reconstruct potential past distributions for ancestral lineages across all species in the clade and across a paleoclimatic record extending from the late Pliocene. Time calibration based on both nuclear and chloroplast trees recovers a mid- to late-Pleistocene date for most inferred hybridization events, a timeframe concomitant with repeated geographic range restriction into overlapping refugia. Our results indicate an important role for past episodes of climate change, and the contrasting responses of species with differing ecological strategies, in generating novel patterns of range contact among plant communities and therefore new opportunities for hybridization. The new ancestral niche method flexibly models the shape of niche while incorporating diverse sources of uncertainty and will be an important addition to the current comparative methods toolkit.

Authors

  • Folk, Ryan A. ;
  • Gaynor, Michelle L. ;
  • Engle-Wrye, Nicholas J. ;
  • O’Meara, Brian C. ;
  • Soltis, Pamela S. ;
  • Soltis, Douglas E. ;
  • Guralnick, Robert P. ;
  • Smith, Stephen A. ;
  • Grady, Charles J. ;
  • Okuyama, Yudai
2 Citations0 Mentions77% FAIR1.5 Dataset Index
10.5061/dryad.n5tb2rbznFebruary 2024

Empirical dataset, code and result for Temperate and Tropical conifers analyses.

This file contains the data, the R statistical environment scripts and the results for the analyses of the biogeography of Tropical and Temperate conifers. The file is a compressed file in 'tar.gz' format created on a Mac computer.

Authors

  • Caetano, Daniel S. ;
  • O'Meara, Brian ;
  • Beaulieu, Jeremy
0 Citations0 Mentions81% FAIR2.0 Dataset Index
10.6084/m9.figshare.6146768.v1January 2018

Empirical dataset, code and result for Temperate and Tropical conifers analyses.

This file contains the data, the R statistical environment scripts and the results for the analyses of the biogeography of Tropical and Temperate conifers. The file is a compressed file in 'tar.gz' format created on a Mac computer.

Authors

  • Caetano, Daniel S. ;
  • O'Meara, Brian ;
  • Beaulieu, Jeremy
0 Citations0 Mentions81% FAIR2.0 Dataset Index
10.6084/m9.figshare.6146768January 2018

Supplementary material: GeoSSE+extirpation simulations

Data, results and code for the simulation study in the Supplementary Material. Data is stored in 'RData' format for the R statistical programming. Code is available as a Markdown document (both 'Rmd' and 'pdf' formats). Code and markdown was created in RStudio. Results are presented as '.zip' packages.
Plese see more information on the 'README.txt' file

Authors

  • Caetano, Daniel S. ;
  • O'Meara, Brian ;
  • Beaulieu, Jeremy
0 Citations0 Mentions13% FAIR0.3 Dataset Index
10.6084/m9.figshare.6146765.v1January 2018

Supplementary material: GeoSSE+extirpation simulations

Data, results and code for the simulation study in the Supplementary Material. Data is stored in 'RData' format for the R statistical programming. Code is available as a Markdown document (both 'Rmd' and 'pdf' formats). Code and markdown was created in RStudio. Results are presented as '.zip' packages.
Plese see more information on the 'README.txt' file

Authors

  • Caetano, Daniel S. ;
  • O'Meara, Brian ;
  • Beaulieu, Jeremy
0 Citations0 Mentions85% FAIR2.1 Dataset Index
10.6084/m9.figshare.6146765January 2018

Simulation study: datasets, code, and results

Data set, code and results for the simulations. Data is stored in 'RData' format for the R statistical environment. Code is in Markdown format (both 'Rmd' and the exported 'pdf' files). Results are compressed in .zip files and separated by simulation scenario.
See 'README.txt' file for more information.

Authors

  • Caetano, Daniel S. ;
  • O'Meara, Brian ;
  • Beaulieu, Jeremy
0 Citations0 Mentions85% FAIR2.1 Dataset Index
10.6084/m9.figshare.6146645.v1January 2018

Simulation study: datasets, code, and results

Data set, code and results for the simulations. Data is stored in 'RData' format for the R statistical environment. Code is in Markdown format (both 'Rmd' and the exported 'pdf' files). Results are compressed in .zip files and separated by simulation scenario.
See 'README.txt' file for more information.

Authors

  • Caetano, Daniel S. ;
  • O'Meara, Brian ;
  • Beaulieu, Jeremy
0 Citations0 Mentions85% FAIR2.1 Dataset Index
10.6084/m9.figshare.6146645January 2018

dryad

No description available

Authors

  • Carstens, Bryan C. ;
  • Morales, Ariadna A. ;
  • Jackson, Nathan ;
  • O'Meara, Brian C.
0 Citations0 Mentions77% FAIR1.9 Dataset Index
10.5061/dryad.3d120/1January 2017

SuppMaterial

No description available

Authors

  • Morales, Ariadna E. ;
  • Jackson, Nathan D. ;
  • Dewey, Tanya A. ;
  • O'Meara, Brian C. ;
  • Carstens, Bryan C.
0 Citations0 Mentions77% FAIR1.7 Dataset Index
10.5061/dryad.b0q2g/3January 2016

Morales.etal.Supp_files_dryad

No description available

Authors

  • Morales, Ariadna E. ;
  • Jackson, Nathan D. ;
  • Dewey, Tanya A. ;
  • O'Meara, Brian C. ;
  • Carstens, Bryan C.
0 Citations0 Mentions77% FAIR1.7 Dataset Index
10.5061/dryad.b0q2g/1January 2016