Automated Author Profile

Yang, Guang-You

Current S-Index

1.1

Sum of Dataset Indices for all datasets

Average Dataset Index per Dataset

0.5

Average Dataset Index per dataset

Total Datasets

2

Total datasets for this author

Average FAIR Score

49.0%

Average FAIR Score per dataset

Total Citations

0

Total citations to the author's datasets

Total Mentions

0

Total mentions of the author's datasets

S-Index Interpretation

S-Index Over Time

Cumulative Citations Over Time

Cumulative Mentions Over Time

Datasets

Absence of population genetic structure in <i>Heterakis gallinarum</i> of chicken from Sichuan, inferred from mitochondrial cytochrome c oxidase subunit I gene

Population genetics information provides a foundation for understanding the transmission and epidemiology of parasite and, therefore, may be used to assist in the control of parasitosis. However, limited available sequence information in Heterakis gallinarum has greatly impeded the study in this area. In this study, we first investigated the genetic variability and genetic structure of H. gallinarum. The 1325 bp fragments of the mitochondrial COX1 gene were amplified in 56 isolates of H. gallinarum from seven different geographical regions in Sichuan province, China. The 56 sequences were classified into 22 haplotypes (H1–H22). The values of haplotype diversity (0.712) and nucleotide diversity (0.00158) in Sichuan population indicate a rapid expansion occurred from a relatively small, short-term effective population in the past. The haplotype network formed a distribution around H1 in a star-like topology, and the haplotypes did not cluster according to their geographical location. Similar conclusions could be made from MP phylogenetic tree. The Fst value (Fst<0.16965) and AMOVA analysis revealed that no significant genetic differentiation was observed among the seven different geographical populations. Neutrality tests (Tajima's D and Fu’s Fs) and mismatch analysis indicated that H. gallinarum experienced a population expansion in the past. Our results indicated that H. gallinarum experienced a rapid population expansion in the past, and there was a low genetic diversity and an absence of population structure across the population.

Authors

  • Gu, Xiaobin ;
  • Zhu, Jun-Yang ;
  • Jian, Ke-Ling ;
  • Wang, Bao-Jian ;
  • Peng, Xue-Rong ;
  • Yang, Guang-You ;
  • Wang, Tao ;
  • Zhong, Zhi-Jun ;
  • Peng, Ke-Yun
0 Citations0 Mentions85% FAIR0.9 Dataset Index
10.6084/m9.figshare.1568092January 2015

Absence of population genetic structure in <i>Heterakis gallinarum</i> of chicken from Sichuan, inferred from mitochondrial cytochrome c oxidase subunit I gene

Population genetics information provides a foundation for understanding the transmission and epidemiology of parasite and, therefore, may be used to assist in the control of parasitosis. However, limited available sequence information in Heterakis gallinarum has greatly impeded the study in this area. In this study, we first investigated the genetic variability and genetic structure of H. gallinarum. The 1325 bp fragments of the mitochondrial COX1 gene were amplified in 56 isolates of H. gallinarum from seven different geographical regions in Sichuan province, China. The 56 sequences were classified into 22 haplotypes (H1–H22). The values of haplotype diversity (0.712) and nucleotide diversity (0.00158) in Sichuan population indicate a rapid expansion occurred from a relatively small, short-term effective population in the past. The haplotype network formed a distribution around H1 in a star-like topology, and the haplotypes did not cluster according to their geographical location. Similar conclusions could be made from MP phylogenetic tree. The Fst value (Fst<0.16965) and AMOVA analysis revealed that no significant genetic differentiation was observed among the seven different geographical populations. Neutrality tests (Tajima's D and Fu’s Fs) and mismatch analysis indicated that H. gallinarum experienced a population expansion in the past. Our results indicated that H. gallinarum experienced a rapid population expansion in the past, and there was a low genetic diversity and an absence of population structure across the population.

Authors

  • Gu, Xiaobin ;
  • Zhu, Jun-Yang ;
  • Jian, Ke-Ling ;
  • Wang, Bao-Jian ;
  • Peng, Xue-Rong ;
  • Yang, Guang-You ;
  • Wang, Tao ;
  • Zhong, Zhi-Jun ;
  • Peng, Ke-Yun
0 Citations0 Mentions13% FAIR0.1 Dataset Index
10.6084/m9.figshare.1568092.v1January 2015