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Kasahara, Hiroyuki

Current S-Index

4.9

Sum of Dataset Indices for all datasets

Average Dataset Index per Dataset

0.5

Average Dataset Index per dataset

Total Datasets

10

Total datasets for this author

Average FAIR Score

78.8%

Average FAIR Score per dataset

Total Citations

1

Total citations to the author's datasets

Total Mentions

0

Total mentions of the author's datasets

S-Index Interpretation

S-Index Over Time

Cumulative Citations Over Time

Cumulative Mentions Over Time

Datasets

Data from: Genome sequence of Striga asiatica provides insight into the evolution of plant parasitism (Version: 1)

Parasitic plants in the genus Striga, commonly known as witchweeds, cause major crop losses in sub-Saharan Africa and pose a threat to agriculture worldwide. An understanding of Striga parasite biology, which could lead to agricultural solutions, has been hampered by the lack of genome information. Here we report the draft genome sequence of Striga asiatica with 34,577 predicted protein-coding genes, which reflects gene family contractions and expansions that are consistent with a three-phase model of parasitic plant genome evolution. Striga seeds germinate in response to host-derived strigolactones (SLs) and then develop a specialised penetration structure, the haustorium, to invade the host root. A family of SL receptors has undergone a striking expansion, suggesting a molecular basis for the evolution of broad host range among Striga spp. We found that genes involved in lateral root development in non-parasitic model species are coordinately induced during haustorium development in Striga, suggesting a pathway that was partly co-opted during the evolution of the haustorium. In addition, we found evidence for horizontal transfer of host genes as well as retrotransposons, indicating gene flow to S. asiatica from hosts. Our results provide valuable insights into the evolution of parasitism and a key resource for the future development of Striga control strategies.

Authors

  • Yoshida, Satoko ;
  • Kim, Seungill ;
  • Wafula, Eric K. ;
  • Tanskanen, Jaakko ;
  • Kim, Yong-Min ;
  • Honaas, Loren ;
  • Yang, Zhenzhen ;
  • Spallek, Thomas ;
  • Conn, Caitlin E. ;
  • Ichihashi, Yasunori ;
  • Cheong, Kyeongchae ;
  • Cui, Songkui ;
  • Der, Joshua P. ;
  • Gundlach, Heidrun ;
  • Jiao, Yuannian ;
  • Hori, Chiaki ;
  • Ishida, Juliane K. ;
  • Kasahara, Hiroyuki ;
  • Kiba, Takatoshi ;
  • Kim, Myung-Shin ;
  • Koo, Namjin ;
  • Laohavisit, Anuphon ;
  • Lee, Yong-Hwan ;
  • Lumba, Shelley ;
  • McCourt, Peter ;
  • Mortimer, Jenny C. ;
  • Mutuku, J. Musembi ;
  • Nomura, Takahito ;
  • Sasaki-Sekimoto, Yuko ;
  • Seto, Yoshiya ;
  • Wang, Yu ;
  • Wakatake, Takanori ;
  • Sakakibara, Hitoshi ;
  • Demura, Taku ;
  • Yamaguchi, Shinjiro ;
  • Yoneyama, Koichi ;
  • Manabe, Ri-ichiroh ;
  • Nelson, David C. ;
  • Schulman, Alan H. ;
  • Timko, Michael P. ;
  • dePamphilis, Claude W. ;
  • Choi, Doil ;
  • Shirasu, Ken
1 Citation0 Mentions77% FAIR0.8 Dataset Index
10.5061/dryad.53t35742019

RT HGT sequences (Version: 1)

No description available

Authors

  • Yoshida, Satoko ;
  • Kim, Seungill ;
  • Wafula, Eric K. ;
  • Tanskanen, Jaakko ;
  • Kim, Yong-Min ;
  • Honaas, Loren ;
  • Yang, Zhenzhen ;
  • Spallek, Thomas ;
  • Conn, Caitlin E. ;
  • Ichihashi, Yasunori ;
  • Cheong, Kyeongchae ;
  • Cui, Songkui ;
  • Der, Joshua P. ;
  • Gundlach, Heidrun ;
  • Jiao, Yuannian ;
  • Hori, Chiaki ;
  • Ishida, Juliane K. ;
  • Kasahara, Hiroyuki ;
  • Kiba, Takatoshi ;
  • Kim, Myung-Shin ;
  • Koo, Namjin ;
  • Laohavisit, Anuphon ;
  • Lee, Yong-Hwan ;
  • Lumba, Shelley ;
  • McCourt, Peter ;
  • Mortimer, Jenny C. ;
  • Mutuku, J. Musembi ;
  • Nomura, Takahito ;
  • Sasaki-Sekimoto, Yuko ;
  • Seto, Yoshiya ;
  • Wang, Yu ;
  • Wakatake, Takanori ;
  • Sakakibara, Hitoshi ;
  • Demura, Taku ;
  • Yamaguchi, Shinjiro ;
  • Yoneyama, Koichi ;
  • Manabe, Ri-Ichiroh ;
  • Nelson, David C. ;
  • Schulman, Alan H. ;
  • Timko, Michael P. ;
  • DePamphilis, Claude W. ;
  • Choi, Doil ;
  • Shirasu, Ken
0 Citations0 Mentions77% FAIR0.5 Dataset Index
10.5061/dryad.53t3574/82019

Sh14Contig_protein.fasta (Version: 1)

No description available

Authors

  • Yoshida, Satoko ;
  • Kim, Seungill ;
  • Wafula, Eric K. ;
  • Tanskanen, Jaakko ;
  • Kim, Yong-Min ;
  • Honaas, Loren ;
  • Yang, Zhenzhen ;
  • Spallek, Thomas ;
  • Conn, Caitlin E. ;
  • Ichihashi, Yasunori ;
  • Cheong, Kyeongchae ;
  • Cui, Songkui ;
  • Der, Joshua P. ;
  • Gundlach, Heidrun ;
  • Jiao, Yuannian ;
  • Hori, Chiaki ;
  • Ishida, Juliane K. ;
  • Kasahara, Hiroyuki ;
  • Kiba, Takatoshi ;
  • Kim, Myung-Shin ;
  • Koo, Namjin ;
  • Laohavisit, Anuphon ;
  • Lee, Yong-Hwan ;
  • Lumba, Shelley ;
  • McCourt, Peter ;
  • Mortimer, Jenny C. ;
  • Mutuku, J. Musembi ;
  • Nomura, Takahito ;
  • Sasaki-Sekimoto, Yuko ;
  • Seto, Yoshiya ;
  • Wang, Yu ;
  • Wakatake, Takanori ;
  • Sakakibara, Hitoshi ;
  • Demura, Taku ;
  • Yamaguchi, Shinjiro ;
  • Yoneyama, Koichi ;
  • Manabe, Ri-Ichiroh ;
  • Nelson, David C. ;
  • Schulman, Alan H. ;
  • Timko, Michael P. ;
  • DePamphilis, Claude W. ;
  • Choi, Doil ;
  • Shirasu, Ken
0 Citations0 Mentions77% FAIR0.4 Dataset Index
10.5061/dryad.53t3574/62019

SGA_annotation.gff (Version: 1)

No description available

Authors

  • Yoshida, Satoko ;
  • Kim, Seungill ;
  • Wafula, Eric K. ;
  • Tanskanen, Jaakko ;
  • Kim, Yong-Min ;
  • Honaas, Loren ;
  • Yang, Zhenzhen ;
  • Spallek, Thomas ;
  • Conn, Caitlin E. ;
  • Ichihashi, Yasunori ;
  • Cheong, Kyeongchae ;
  • Cui, Songkui ;
  • Der, Joshua P. ;
  • Gundlach, Heidrun ;
  • Jiao, Yuannian ;
  • Hori, Chiaki ;
  • Ishida, Juliane K. ;
  • Kasahara, Hiroyuki ;
  • Kiba, Takatoshi ;
  • Kim, Myung-Shin ;
  • Koo, Namjin ;
  • Laohavisit, Anuphon ;
  • Lee, Yong-Hwan ;
  • Lumba, Shelley ;
  • McCourt, Peter ;
  • Mortimer, Jenny C. ;
  • Mutuku, J. Musembi ;
  • Nomura, Takahito ;
  • Sasaki-Sekimoto, Yuko ;
  • Seto, Yoshiya ;
  • Wang, Yu ;
  • Wakatake, Takanori ;
  • Sakakibara, Hitoshi ;
  • Demura, Taku ;
  • Yamaguchi, Shinjiro ;
  • Yoneyama, Koichi ;
  • Manabe, Ri-Ichiroh ;
  • Nelson, David C. ;
  • Schulman, Alan H. ;
  • Timko, Michael P. ;
  • DePamphilis, Claude W. ;
  • Choi, Doil ;
  • Shirasu, Ken
0 Citations0 Mentions81% FAIR0.5 Dataset Index
10.5061/dryad.53t3574/72019

SGA2.02_all_CDS (Version: 1)

No description available

Authors

  • Yoshida, Satoko ;
  • Kim, Seungill ;
  • Wafula, Eric K. ;
  • Tanskanen, Jaakko ;
  • Kim, Yong-Min ;
  • Honaas, Loren ;
  • Yang, Zhenzhen ;
  • Spallek, Thomas ;
  • Conn, Caitlin E. ;
  • Ichihashi, Yasunori ;
  • Cheong, Kyeongchae ;
  • Cui, Songkui ;
  • Der, Joshua P. ;
  • Gundlach, Heidrun ;
  • Jiao, Yuannian ;
  • Hori, Chiaki ;
  • Ishida, Juliane K. ;
  • Kasahara, Hiroyuki ;
  • Kiba, Takatoshi ;
  • Kim, Myung-Shin ;
  • Koo, Namjin ;
  • Laohavisit, Anuphon ;
  • Lee, Yong-Hwan ;
  • Lumba, Shelley ;
  • McCourt, Peter ;
  • Mortimer, Jenny C. ;
  • Mutuku, J. Musembi ;
  • Nomura, Takahito ;
  • Sasaki-Sekimoto, Yuko ;
  • Seto, Yoshiya ;
  • Wang, Yu ;
  • Wakatake, Takanori ;
  • Sakakibara, Hitoshi ;
  • Demura, Taku ;
  • Yamaguchi, Shinjiro ;
  • Yoneyama, Koichi ;
  • Manabe, Ri-Ichiroh ;
  • Nelson, David C. ;
  • Schulman, Alan H. ;
  • Timko, Michael P. ;
  • DePamphilis, Claude W. ;
  • Choi, Doil ;
  • Shirasu, Ken
0 Citations0 Mentions77% FAIR0.4 Dataset Index
10.5061/dryad.53t3574/22019

SGA2.02_all_proteins (Version: 1)

No description available

Authors

  • Yoshida, Satoko ;
  • Kim, Seungill ;
  • Wafula, Eric K. ;
  • Tanskanen, Jaakko ;
  • Kim, Yong-Min ;
  • Honaas, Loren ;
  • Yang, Zhenzhen ;
  • Spallek, Thomas ;
  • Conn, Caitlin E. ;
  • Ichihashi, Yasunori ;
  • Cheong, Kyeongchae ;
  • Cui, Songkui ;
  • Der, Joshua P. ;
  • Gundlach, Heidrun ;
  • Jiao, Yuannian ;
  • Hori, Chiaki ;
  • Ishida, Juliane K. ;
  • Kasahara, Hiroyuki ;
  • Kiba, Takatoshi ;
  • Kim, Myung-Shin ;
  • Koo, Namjin ;
  • Laohavisit, Anuphon ;
  • Lee, Yong-Hwan ;
  • Lumba, Shelley ;
  • McCourt, Peter ;
  • Mortimer, Jenny C. ;
  • Mutuku, J. Musembi ;
  • Nomura, Takahito ;
  • Sasaki-Sekimoto, Yuko ;
  • Seto, Yoshiya ;
  • Wang, Yu ;
  • Wakatake, Takanori ;
  • Sakakibara, Hitoshi ;
  • Demura, Taku ;
  • Yamaguchi, Shinjiro ;
  • Yoneyama, Koichi ;
  • Manabe, Ri-Ichiroh ;
  • Nelson, David C. ;
  • Schulman, Alan H. ;
  • Timko, Michael P. ;
  • DePamphilis, Claude W. ;
  • Choi, Doil ;
  • Shirasu, Ken
0 Citations0 Mentions77% FAIR0.4 Dataset Index
10.5061/dryad.53t3574/32019

Sh14Contig_functionalannotation (Version: 1)

No description available

Authors

  • Yoshida, Satoko ;
  • Kim, Seungill ;
  • Wafula, Eric K. ;
  • Tanskanen, Jaakko ;
  • Kim, Yong-Min ;
  • Honaas, Loren ;
  • Yang, Zhenzhen ;
  • Spallek, Thomas ;
  • Conn, Caitlin E. ;
  • Ichihashi, Yasunori ;
  • Cheong, Kyeongchae ;
  • Cui, Songkui ;
  • Der, Joshua P. ;
  • Gundlach, Heidrun ;
  • Jiao, Yuannian ;
  • Hori, Chiaki ;
  • Ishida, Juliane K. ;
  • Kasahara, Hiroyuki ;
  • Kiba, Takatoshi ;
  • Kim, Myung-Shin ;
  • Koo, Namjin ;
  • Laohavisit, Anuphon ;
  • Lee, Yong-Hwan ;
  • Lumba, Shelley ;
  • McCourt, Peter ;
  • Mortimer, Jenny C. ;
  • Mutuku, J. Musembi ;
  • Nomura, Takahito ;
  • Sasaki-Sekimoto, Yuko ;
  • Seto, Yoshiya ;
  • Wang, Yu ;
  • Wakatake, Takanori ;
  • Sakakibara, Hitoshi ;
  • Demura, Taku ;
  • Yamaguchi, Shinjiro ;
  • Yoneyama, Koichi ;
  • Manabe, Ri-Ichiroh ;
  • Nelson, David C. ;
  • Schulman, Alan H. ;
  • Timko, Michael P. ;
  • DePamphilis, Claude W. ;
  • Choi, Doil ;
  • Shirasu, Ken
0 Citations0 Mentions77% FAIR0.4 Dataset Index
10.5061/dryad.53t3574/42019

Sh14Contig.fasta (Version: 1)

No description available

Authors

  • Yoshida, Satoko ;
  • Kim, Seungill ;
  • Wafula, Eric K. ;
  • Tanskanen, Jaakko ;
  • Kim, Yong-Min ;
  • Honaas, Loren ;
  • Yang, Zhenzhen ;
  • Spallek, Thomas ;
  • Conn, Caitlin E. ;
  • Ichihashi, Yasunori ;
  • Cheong, Kyeongchae ;
  • Cui, Songkui ;
  • Der, Joshua P. ;
  • Gundlach, Heidrun ;
  • Jiao, Yuannian ;
  • Hori, Chiaki ;
  • Ishida, Juliane K. ;
  • Kasahara, Hiroyuki ;
  • Kiba, Takatoshi ;
  • Kim, Myung-Shin ;
  • Koo, Namjin ;
  • Laohavisit, Anuphon ;
  • Lee, Yong-Hwan ;
  • Lumba, Shelley ;
  • McCourt, Peter ;
  • Mortimer, Jenny C. ;
  • Mutuku, J. Musembi ;
  • Nomura, Takahito ;
  • Sasaki-Sekimoto, Yuko ;
  • Seto, Yoshiya ;
  • Wang, Yu ;
  • Wakatake, Takanori ;
  • Sakakibara, Hitoshi ;
  • Demura, Taku ;
  • Yamaguchi, Shinjiro ;
  • Yoneyama, Koichi ;
  • Manabe, Ri-Ichiroh ;
  • Nelson, David C. ;
  • Schulman, Alan H. ;
  • Timko, Michael P. ;
  • DePamphilis, Claude W. ;
  • Choi, Doil ;
  • Shirasu, Ken
0 Citations0 Mentions77% FAIR0.4 Dataset Index
10.5061/dryad.53t3574/52019

Testing the Number of Components in Normal Mixture Regression Models

No description available

Authors

  • Kasahara, Hiroyuki ;
  • Shimotsu, Katsumi
0 Citations0 Mentions85% FAIR0.5 Dataset Index
10.6084/m9.figshare.20647982016

Testing the Number of Components in Normal Mixture Regression Models

No description available

Authors

  • Kasahara, Hiroyuki ;
  • Shimotsu, Katsumi
0 Citations0 Mentions85% FAIR0.5 Dataset Index
10.6084/m9.figshare.2064798.v12016