Automated Author Profile

Cooper, Elizabeth A.

Current S-Index

3.7

Sum of Dataset Indices for all datasets

Average Dataset Index per Dataset

0.6

Average Dataset Index per dataset

Total Datasets

6

Total datasets for this author

Average FAIR Score

83.7%

Average FAIR Score per dataset

Total Citations

2

Total citations to the author's datasets

Total Mentions

0

Total mentions of the author's datasets

S-Index Interpretation

S-Index Over Time

Cumulative Citations Over Time

Cumulative Mentions Over Time

Datasets

Supplemental Material for Boatwright et al., 2021

Supplemental figures, tables and the CP-NAM VCF file. GBS were processed using Tassel version 5.2.52 (Bradbury et al.2007) following the GBS version 2 pipeline procedures (Glaubitz et al.2014). Tags were63aligned to the BTx623 version 3.1 annotated reference genome (McCormick et al. 2018), obtained from Phytozome (Goodstein et al. 2012), using BWA version 0.7.17 (Li and Durbin 2010). Beagle version 5.1 was used to impute missing genotype data in the variant call format (VCF) file resulting from the Tassel pipeline (Browning et al. 2018). The effects of SNPs were predicted using snpEff (Cingolani et al.2012).

Authors

  • J. Lucas Boatwright ;
  • Brenton, Zachary W. ;
  • Boyles, Richard E. ;
  • Sirjan Sapkota ;
  • Myers, Matthew T. ;
  • Jordan, Kathleen E. ;
  • Dale, Savanah M. ;
  • Shakoor, Nadia ;
  • Cooper, Elizabeth A. ;
  • Morris, Geoffrey P. ;
  • Kresovich, Stephen
0 Citations0 Mentions88% FAIR0.5 Dataset Index
10.25387/g3.136458022021

Supplemental Material for Boatwright et al., 2021

Supplemental figures, tables and the CP-NAM VCF file. GBS were processed using Tassel version 5.2.52 (Bradbury et al.2007) following the GBS version 2 pipeline procedures (Glaubitz et al.2014). Tags were63aligned to the BTx623 version 3.1 annotated reference genome (McCormick et al. 2018), obtained from Phytozome (Goodstein et al. 2012), using BWA version 0.7.17 (Li and Durbin 2010). Beagle version 5.1 was used to impute missing genotype data in the variant call format (VCF) file resulting from the Tassel pipeline (Browning et al. 2018). The effects of SNPs were predicted using snpEff (Cingolani et al.2012).

Authors

  • J. Lucas Boatwright ;
  • Brenton, Zachary W. ;
  • Boyles, Richard E. ;
  • Sirjan Sapkota ;
  • Myers, Matthew T. ;
  • Jordan, Kathleen E. ;
  • Dale, Savanah M. ;
  • Shakoor, Nadia ;
  • Cooper, Elizabeth A. ;
  • Morris, Geoffrey P. ;
  • Kresovich, Stephen
0 Citations0 Mentions87% FAIR0.5 Dataset Index
10.25387/g3.13645802.v12021

Supplemental Material for Songsomboon et al., 2021

There data are simulation result, supplement tables, and figures for additional explanation of the "Genomic patterns of structural variation among diverse genotypes of Sorghum bicolor and a potential role for deletions in local adaptation".

Authors

  • Songsomboon, Kittikun ;
  • Brenton, Zachary ;
  • Heuser, James ;
  • Kresovich, Stephen ;
  • Shakoor, Nadia ;
  • Mockler, Todd ;
  • Cooper, Elizabeth A.
2 Citations0 Mentions87% FAIR1.2 Dataset Index
10.25387/g3.145254752021

Supplemental Material for Songsomboon et al., 2021

There data are simulation result, supplement tables, and figures for additional explanation of the "Genomic patterns of structural variation among diverse genotypes of Sorghum bicolor and a potential role for deletions in local adaptation".

Authors

  • Songsomboon, Kittikun ;
  • Brenton, Zachary ;
  • Heuser, James ;
  • Kresovich, Stephen ;
  • Shakoor, Nadia ;
  • Mockler, Todd ;
  • Cooper, Elizabeth A.
0 Citations0 Mentions87% FAIR0.7 Dataset Index
10.25387/g3.14525475.v12021

MClade_MC1R_ASIP.hmp

No description available

Authors

  • Uy, J. Albert C. ;
  • Cooper, Elizabeth A. ;
  • Cutie, Stephen ;
  • Concannon, Moira R. ;
  • Poelstra, Jelmer W. ;
  • Moyle, Robert G. ;
  • Filardi, Christopher E.
0 Citations0 Mentions77% FAIR0.4 Dataset Index
10.5061/dryad.877n3/12016

Mon_filter10X.hmp

No description available

Authors

  • Uy, J. Albert C. ;
  • Cooper, Elizabeth A. ;
  • Cutie, Stephen ;
  • Concannon, Moira R. ;
  • Poelstra, Jelmer W. ;
  • Moyle, Robert G. ;
  • Filardi, Christopher E.
0 Citations0 Mentions77% FAIR0.6 Dataset Index
10.5061/dryad.877n3/22016