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Automated Author Profile

Bergmark, Lasse

Current S-Index

3.4

Sum of Dataset Indices for all datasets

Average Dataset Index per Dataset

0.6

Average Dataset Index per dataset

Total Datasets

6

Total datasets for this author

Average FAIR Score

37.2%

Average FAIR Score per dataset

Total Citations

4

Total citations to the author's datasets

Total Mentions

0

Total mentions of the author's datasets

S-Index Interpretation

S-Index Over Time

Cumulative Citations Over Time

Cumulative Mentions Over Time

Datasets

Overview - DNA quantities required for NGS library preparation

Overview of next-generation sequencing (NGS) platforms, and DNA amounts required for library preparation.

This table relates to the article:
Berith E. Knudsen, Lasse Bergmark, Patrick Munk, Oksana Lukjancenko, Anders Priemé, Frank M. Aarestrup, Sünje J. Pamp (2016) Impact of Sample Type and DNA Isolation Procedure on Genomic Inference of Microbiome Composition. mSystems Oct 2016, 1 (5) e00095-16; DOI: 10.1128/mSystems.00095-16 http://msystems.asm.org/content/1/5/e00095-16

Authors

  • Bergmark, Lasse
0 Citations0 Mentions13% FAIR0.1 Dataset Index
10.6084/m9.figshare.3487085.v1January 2016

Overview - DNA quantities required for NGS library preparation

Overview of next-generation sequencing (NGS) platforms, and DNA amounts required for library preparation.

This table relates to the article:
Berith E. Knudsen, Lasse Bergmark, Patrick Munk, Oksana Lukjancenko, Anders Priemé, Frank M. Aarestrup, Sünje J. Pamp (2016) Impact of Sample Type and DNA Isolation Procedure on Genomic Inference of Microbiome Composition. mSystems Oct 2016, 1 (5) e00095-16; DOI: 10.1128/mSystems.00095-16 http://msystems.asm.org/content/1/5/e00095-16

Authors

  • Bergmark, Lasse
0 Citations0 Mentions13% FAIR0.1 Dataset Index
10.6084/m9.figshare.3487085January 2016

Differential abundance of bacterial families (based on their relative abundance) - Related to Fig. 3

Differential abundance of bacterial families (based on their respective relative abundance). Pairwise comparison by DNA extraction method was performed using the relative abundance of each family and their log2-fold difference (column vs. rows). This figure relates to the article:
Berith E. Knudsen, Lasse Bergmark, Patrick Munk, Oksana Lukjancenko, Anders Priemé, Frank M. Aarestrup, Sünje J. Pamp (2016) Impact of Sample Type and DNA Isolation Procedure on Genomic Inference of Microbiome Composition. mSystems Oct 2016, 1 (5) e00095-16; DOI: 10.1128/mSystems.00095-16 http://msystems.asm.org/content/1/5/e00095-16

Authors

  • Pamp, Sünje Johanna ;
  • Knudsen, Berith E. ;
  • Bergmark, Lasse
0 Citations0 Mentions85% FAIR0.9 Dataset Index
10.6084/m9.figshare.3811254.v1January 2016

Differential abundance of bacterial families (based on their relative abundance) - Related to Fig. 3

Differential abundance of bacterial families (based on their respective relative abundance). Pairwise comparison by DNA extraction method was performed using the relative abundance of each family and their log2-fold difference (column vs. rows). This figure relates to the article:
Berith E. Knudsen, Lasse Bergmark, Patrick Munk, Oksana Lukjancenko, Anders Priemé, Frank M. Aarestrup, Sünje J. Pamp (2016) Impact of Sample Type and DNA Isolation Procedure on Genomic Inference of Microbiome Composition. mSystems Oct 2016, 1 (5) e00095-16; DOI: 10.1128/mSystems.00095-16 http://msystems.asm.org/content/1/5/e00095-16

Authors

  • Pamp, Sünje Johanna ;
  • Knudsen, Berith E. ;
  • Bergmark, Lasse
2 Citations0 Mentions85% FAIR1.6 Dataset Index
10.6084/m9.figshare.3811254January 2016

Similarity & Dissimilarity between Communities - Human feces, Pig feces, Hospital sewage - Different DNA Extraction Methods

The similarity and dissimilarity within and between microbial communities - from human feces, pig feces, and hospital sewage, processed with seven different DNA extraction protocols - was assessed using Jaccard and Bray Curtis distances, respectively. These figures relate to the article:
Berith E. Knudsen, Lasse Bergmark, Patrick Munk, Oksana Lukjancenko, Anders Priemé, Frank M. Aarestrup, Sünje J. Pamp (2016) Impact of Sample Type and DNA Isolation Procedure on Genomic Inference of Microbiome Composition. mSystems Oct 2016, 1 (5) e00095-16; DOI: 10.1128/mSystems.00095-16 http://msystems.asm.org/content/1/5/e00095-16

Authors

  • Bergmark, Lasse ;
  • Pamp, Sünje Johanna
0 Citations0 Mentions13% FAIR0.3 Dataset Index
10.6084/m9.figshare.3814239.v1January 2016

Similarity & Dissimilarity between Communities - Human feces, Pig feces, Hospital sewage - Different DNA Extraction Methods

The similarity and dissimilarity within and between microbial communities - from human feces, pig feces, and hospital sewage, processed with seven different DNA extraction protocols - was assessed using Jaccard and Bray Curtis distances, respectively.
These figures relate to the article:
Berith E. Knudsen, Lasse Bergmark, Patrick Munk, Oksana Lukjancenko, Anders Priemé, Frank M. Aarestrup, Sünje J. Pamp (2016) Impact of Sample Type and DNA Isolation Procedure on Genomic Inference of Microbiome Composition. mSystems Oct 2016, 1 (5) e00095-16; DOI: 10.1128/mSystems.00095-16 http://msystems.asm.org/content/1/5/e00095-16

Authors

  • Bergmark, Lasse ;
  • Pamp, Sünje Johanna
2 Citations0 Mentions13% FAIR1.0 Dataset Index
10.6084/m9.figshare.3814239January 2016