Automated Author Profile

Ehrlich, Stanislav, D

Current S-Index

0.7

Sum of Dataset Indices for all datasets

Average Dataset Index per Dataset

0.7

Average Dataset Index per dataset

Total Datasets

1

Total datasets for this author

Average FAIR Score

30.8%

Average FAIR Score per dataset

Total Citations

1

Total citations to the author's datasets

Total Mentions

0

Total mentions of the author's datasets

S-Index Interpretation

S-Index Over Time

Cumulative Citations Over Time

Cumulative Mentions Over Time

Datasets

A catalogue of the pig gut microbiome

The pig is a major species for livestock and biomedicine. We established a comprehensive catalogue of gut microbial genes based on faecal samples of 287 pigs from France, Denmark and China. 7.7 million non-redundant genes representing 719 metagenomic species were identified by deep metagenome sequencing. The pig and human catalogues share 12.6 % and 9.3 % of their genes, respectively, a higher proportion than that shared between the mouse and human catalogues. Importantly, 78 % and 96% of the functional pathways are shared, underscoring the potential use of pigs for biomedical research. The pig gut microbiota is influenced by gender, age and breed. Analysis of the prevalence of antibiotic resistance genes confirmed the efficiency of eliminating antibiotics from animal diet to reduce the risk of dissemination associated with farming systems. The pig microbiome gene catalogue provides a useful resource for metagenomics-based research in biomedicine and for sustainable knowledge-based pig farming.

Authors

  • Xiao, Liang ;
  • Kiilerich, Pia ;
  • Estellé, Jordi ;
  • Ramayo-Caldas, Yuliaxis ;
  • Xia, Zhongkui ;
  • Feng, Qiang ;
  • Liang, Suisha ;
  • Pedersen, Anni, Oyan ;
  • Liu, Chuan ;
  • Kjeldsen, Niels, Jørgen ;
  • Doré, Joël ;
  • Maguin, Emmanuelle ;
  • Pons, Nicolas ;
  • Chatelier, Emmanuelle, Le ;
  • Prifti, Edi ;
  • Li, Junhua ;
  • Jia, Huijue ;
  • Xu, Xun ;
  • Ehrlich, Stanislav, D ;
  • Madsen, Lise ;
  • Kristiansen, Karsten ;
  • Rogel-Gaillard, Claire ;
  • Wang, Jun
1 Citation0 Mentions31% FAIR0.7 Dataset Index
10.5524/1001872016