Automated Author Profile

Rønnestad, Ivar

Current S-Index

16.2

Sum of Dataset Indices for all datasets

Average Dataset Index per Dataset

0.9

Average Dataset Index per dataset

Total Datasets

18

Total datasets for this author

Average FAIR Score

84.2%

Average FAIR Score per dataset

Total Citations

18

Total citations to the author's datasets

Total Mentions

0

Total mentions of the author's datasets

S-Index Interpretation

S-Index Over Time

Cumulative Citations Over Time

Cumulative Mentions Over Time

Datasets

Additional file 6: of Loss of stomach, loss of appetite? Sequencing of the ballan wrasse (Labrus bergylta) genome and intestinal transcriptomic profiling illuminate the evolution of loss of stomach function in fish

The table shows the differentially expressed genes between the different segments. Segment 2 versus (vs) 1, 3 vs 1, 4 vs 1, 3 vs 4 and 3 vs 2. Gene IDs, gene symbol, P-values, P-adjust values and Log2 fold change are given in the table. Expression values are given in the sheet labeled “transcriptome” (XLSX 5003 kb)

Authors

  • Lie, Kai ;
  • Tørresen, Ole ;
  • Solbakken, Monica ;
  • Rønnestad, Ivar ;
  • Tooming-Klunderud, Ave ;
  • Nederbragt, Alexander ;
  • Jentoft, Sissel ;
  • Sæle, Øystein
1 Citation0 Mentions85% FAIR0.7 Dataset Index
10.6084/m9.figshare.59553882018

Additional file 6: of Loss of stomach, loss of appetite? Sequencing of the ballan wrasse (Labrus bergylta) genome and intestinal transcriptomic profiling illuminate the evolution of loss of stomach function in fish

The table shows the differentially expressed genes between the different segments. Segment 2 versus (vs) 1, 3 vs 1, 4 vs 1, 3 vs 4 and 3 vs 2. Gene IDs, gene symbol, P-values, P-adjust values and Log2 fold change are given in the table. Expression values are given in the sheet labeled “transcriptome” (XLSX 5003 kb)

Authors

  • Lie, Kai ;
  • Tørresen, Ole ;
  • Solbakken, Monica ;
  • Rønnestad, Ivar ;
  • Tooming-Klunderud, Ave ;
  • Nederbragt, Alexander ;
  • Jentoft, Sissel ;
  • Sæle, Øystein
1 Citation0 Mentions85% FAIR0.9 Dataset Index
10.6084/m9.figshare.5955388.v12018

Additional file 7: of Loss of stomach, loss of appetite? Sequencing of the ballan wrasse (Labrus bergylta) genome and intestinal transcriptomic profiling illuminate the evolution of loss of stomach function in fish

Excel file showing the statistics of the functional enrichment analysis using the DAVID tool. Number of genes counted for each term (count) P-values, list of genes counted (Genes), p adjust values (Benjamini) and % false discovery rate (FDR) are given in the tables. The figure shows enriched gene ontology terms (GOs) (biological function (BF), cellular compartment (CC) and molecular function (MF)) and KEGG pathways in segment 4 (seg4 vs seg1), segment 1 (seg1 vs 4) and segment 3 vs segment 2. It also shows the complete list of terms used for the Revigo analysis. (XLSX 112 kb)

Authors

  • Lie, Kai ;
  • Tørresen, Ole ;
  • Solbakken, Monica ;
  • Rønnestad, Ivar ;
  • Tooming-Klunderud, Ave ;
  • Nederbragt, Alexander ;
  • Jentoft, Sissel ;
  • Sæle, Øystein
1 Citation0 Mentions85% FAIR0.7 Dataset Index
10.6084/m9.figshare.59554002018

Additional file 7: of Loss of stomach, loss of appetite? Sequencing of the ballan wrasse (Labrus bergylta) genome and intestinal transcriptomic profiling illuminate the evolution of loss of stomach function in fish

Excel file showing the statistics of the functional enrichment analysis using the DAVID tool. Number of genes counted for each term (count) P-values, list of genes counted (Genes), p adjust values (Benjamini) and % false discovery rate (FDR) are given in the tables. The figure shows enriched gene ontology terms (GOs) (biological function (BF), cellular compartment (CC) and molecular function (MF)) and KEGG pathways in segment 4 (seg4 vs seg1), segment 1 (seg1 vs 4) and segment 3 vs segment 2. It also shows the complete list of terms used for the Revigo analysis. (XLSX 112 kb)

Authors

  • Lie, Kai ;
  • Tørresen, Ole ;
  • Solbakken, Monica ;
  • Rønnestad, Ivar ;
  • Tooming-Klunderud, Ave ;
  • Nederbragt, Alexander ;
  • Jentoft, Sissel ;
  • Sæle, Øystein
1 Citation0 Mentions85% FAIR0.9 Dataset Index
10.6084/m9.figshare.5955400.v12018

Additional file 4: of The transcriptome of metamorphosing flatfish

Annotation of the head transcriptome. Contig ID, transcript name, number of GOs and their description and enzymatic codes are shown for each contig. (XLSX 4280 mb)

Authors

  • Alves, Ricardo ;
  • Gomes, Ana ;
  • Stueber, Kurt ;
  • Mbaye Tine ;
  • M. Thorne ;
  • H. Smáradóttir ;
  • Reinhard, Richard ;
  • M. Clark ;
  • Rønnestad, Ivar ;
  • Power, Deborah
1 Citation0 Mentions85% FAIR1.0 Dataset Index
10.6084/m9.figshare.c.3597515_d72016

Additional file 18: of The transcriptome of metamorphosing flatfish

In-house database of candidate genes involved in thyroid gland development/thyroid hormone (TH) metabolism and signaling, including transcripts with a relevant role in TH synthesis, transport and activity. Protein name, Symbol, Accession number (no.), Organism and Biological role are shown. (XLSX 13 kb)

Authors

  • Alves, Ricardo ;
  • Gomes, Ana ;
  • Stueber, Kurt ;
  • Mbaye Tine ;
  • M. Thorne ;
  • H. Smáradóttir ;
  • Reinhard, Richard ;
  • M. Clark ;
  • Rønnestad, Ivar ;
  • Power, Deborah
1 Citation0 Mentions85% FAIR1.0 Dataset Index
10.6084/m9.figshare.c.3597515_d152016

Additional file 19: of The transcriptome of metamorphosing flatfish

In-house database of candidate genes involved in TH signaling/metabolism identified in Xenopus laevis in previously published literature [84, 86, 87, 134]. Protein name, Symbol, Accession number (no.), Organism and References are shown. (XLSX 29 kb)

Authors

  • Alves, Ricardo ;
  • Gomes, Ana ;
  • Stueber, Kurt ;
  • Mbaye Tine ;
  • M. Thorne ;
  • H. Smáradóttir ;
  • Reinhard, Richard ;
  • M. Clark ;
  • Rønnestad, Ivar ;
  • Power, Deborah
1 Citation0 Mentions85% FAIR1.0 Dataset Index
10.6084/m9.figshare.c.3597515_d192016

Additional file 19: of The transcriptome of metamorphosing flatfish

In-house database of candidate genes involved in TH signaling/metabolism identified in Xenopus laevis in previously published literature [84, 86, 87, 134]. Protein name, Symbol, Accession number (no.), Organism and References are shown. (XLSX 29 kb)

Authors

  • Alves, Ricardo ;
  • Gomes, Ana ;
  • Stueber, Kurt ;
  • Mbaye Tine ;
  • M. Thorne ;
  • H. Smáradóttir ;
  • Reinhard, Richard ;
  • M. Clark ;
  • Rønnestad, Ivar ;
  • Power, Deborah
1 Citation0 Mentions85% FAIR0.9 Dataset Index
10.6084/m9.figshare.c.3597515_d19.v12016

Additional file 18: of The transcriptome of metamorphosing flatfish

In-house database of candidate genes involved in thyroid gland development/thyroid hormone (TH) metabolism and signaling, including transcripts with a relevant role in TH synthesis, transport and activity. Protein name, Symbol, Accession number (no.), Organism and Biological role are shown. (XLSX 13 kb)

Authors

  • Alves, Ricardo ;
  • Gomes, Ana ;
  • Stueber, Kurt ;
  • Mbaye Tine ;
  • M. Thorne ;
  • H. Smáradóttir ;
  • Reinhard, Richard ;
  • M. Clark ;
  • Rønnestad, Ivar ;
  • Power, Deborah
1 Citation0 Mentions81% FAIR0.8 Dataset Index
10.6084/m9.figshare.c.3597515_d15.v12016

Additional file 3: of The transcriptome of metamorphosing flatfish

Annotation of the GI-tract transcriptome. Contig ID, transcript name, number of GOs and their description and enzymatic codes are shown for each contig. (XLSX 1784 kb)

Authors

  • Alves, Ricardo ;
  • Gomes, Ana ;
  • Stueber, Kurt ;
  • Mbaye Tine ;
  • M. Thorne ;
  • H. Smáradóttir ;
  • Reinhard, Richard ;
  • M. Clark ;
  • Rønnestad, Ivar ;
  • Power, Deborah
1 Citation0 Mentions85% FAIR1.0 Dataset Index
10.6084/m9.figshare.c.3597515_d12016