Automated Author Profile

Thudi, Mahendar

Current S-Index

3.2

Sum of Dataset Indices for all datasets

Average Dataset Index per Dataset

3.2

Average Dataset Index per dataset

Total Datasets

1

Total datasets for this author

Average FAIR Score

30.8%

Average FAIR Score per dataset

Total Citations

7

Total citations to the author's datasets

Total Mentions

0

Total mentions of the author's datasets

S-Index Interpretation

S-Index Over Time

Cumulative Citations Over Time

Cumulative Mentions Over Time

Datasets

Genomic data of the chickpea (<em>Cicer arietinum</em>).

Chickpea (Cicer arietinum) is one of the world's most consumed pulses. The Chickpea plant has finely divided leaves, giving it a feathery appearance. The pods are oblong (2 to 3 by 1 to 2 cm) and contain one or two beaked seeds which may be white, yellow, red, brown, or nearly black. They do well in a cool, dry climate and are grown in India as a winter crop.
The draft of the chickpea genome is based on genotype CDC Frontier, a Canadian kabuli chickpea variety.

DNA from the chickpea was collected and e sequenced the 0.74 Gb genome to a depth of approximately 207 x with short reads from a series of libraries with various insert sizes ( 170bp, 500bp, 800bp, 2kb, 5kb, 10kb and 20kb) on a HiSeq 2000 sequencer.
The assembled scaffolds of high quality sequences total 153 Gb, with the contig and scaffold N50 values of 645 kb and 39.9 Mb respectively. We identified 28,256 protein-coding genes with an mean coding length of 1,166 bp.

Authors

  • Varshney, Rajeev, K ;
  • Song, Chi ;
  • Saxena, Rachit, K ;
  • Azam, Sarwar ;
  • Yu, Sheng ;
  • Sharpe, Andrew, G ;
  • Cannon, Steven ;
  • Baek, Jongmin ;
  • Rosen, Benjamin, D ;
  • Taran, Bunyamin ;
  • Millan, Teresa ;
  • Zhang, Xudong ;
  • Ramsay, Larissa, D ;
  • Iwata, Aiko ;
  • Wang, Ying ;
  • Nelson, William ;
  • Farmer, Andrew, D ;
  • Gaur, Pooran, M ;
  • Soderlund, Carol ;
  • Penmetsa, R.Varma ;
  • Xu, Chunyan ;
  • Bharti, Arvind, K ;
  • He, Weiming ;
  • Winter, Peter ;
  • Zhao, Shancen ;
  • Hane, James, K ;
  • Carrasquilla-Garcia, Noelia ;
  • Condie, Janet, A ;
  • Upadhyaya, Hari, D ;
  • Luo, Ming-Cheng ;
  • Thudi, Mahendar ;
  • Gowda, C, LL ;
  • Singh, Narendra, P ;
  • Lichtenzveig, Judith ;
  • Gali, Krishna, K ;
  • Rubio, Josefa ;
  • Nadarajan, N ;
  • Dolezel, Jaroslav ;
  • Bansal, Kailash, C ;
  • Xu, Xun ;
  • Edwards, David ;
  • Zhang, Gengyun ;
  • Kahl, Guenter ;
  • Gil, Juan ;
  • Singh, Karam, B ;
  • Datta, Swapan, K ;
  • Jackson, Scott, A ;
  • Wang, Jun ;
  • Cook, Douglas, R
7 Citations0 Mentions31% FAIR3.5 Dataset Index
10.5524/100076January 2014