Automated Author Profile

Lack, Nathan

Current S-Index

10.0

Sum of Dataset Indices for all datasets

Average Dataset Index per Dataset

1.0

Average Dataset Index per dataset

Total Datasets

10

Total datasets for this author

Average FAIR Score

84.6%

Average FAIR Score per dataset

Total Citations

10

Total citations to the author's datasets

Total Mentions

0

Total mentions of the author's datasets

S-Index Interpretation

S-Index Over Time

Cumulative Citations Over Time

Cumulative Mentions Over Time

Datasets

Additional file 8: Table S5. of Determining the origin of synchronous multifocal bladder cancer by exome sequencing

Odd’s ratio and Fisher’s exact test p-values for a frequency difference between SNVs shared among all tumours and SNVs found private to tumours, with respect to dinucleotide context. The table includes results for Patients 1 and 2. Bold lines show significant results with odd’s ratio > 1. (XLS 20 kb)

Authors

  • Acar, Ömer ;
  • Özkurt, Ezgi ;
  • Gulfem Demir ;
  • Saraç, Hilal ;
  • Alkan, Can ;
  • Tarık Esen ;
  • Somel, Mehmet ;
  • Lack, Nathan
1 Citation0 Mentions85% FAIR1.0 Dataset Index
10.6084/m9.figshare.c.3616820_d12015

Additional file 3: Table S3. of Determining the origin of synchronous multifocal bladder cancer by exome sequencing

Odd’s ratio and Fisher’s exact test p-values for a frequency difference between SNVs shared among all tumours and SNVs shared among all samples, with respect to dinucleotide context and trinucleotide context. The table includes results for Patients 1 and 2. Bold lines show significant results with odd’s ratio > 1. (XLS 25 kb)

Authors

  • Acar, Ömer ;
  • Özkurt, Ezgi ;
  • Gulfem Demir ;
  • Saraç, Hilal ;
  • Alkan, Can ;
  • Tarık Esen ;
  • Somel, Mehmet ;
  • Lack, Nathan
1 Citation0 Mentions85% FAIR1.0 Dataset Index
10.6084/m9.figshare.c.3616820_d22015

Additional file 1: Table S1. of Determining the origin of synchronous multifocal bladder cancer by exome sequencing

Number of reads and number of detected SNVs and indels. Cov: coverage. The strict filtering criteria include the GATK quality score (“PASS”), excluding segmental duplications, removing SNVs included in dbSNPv.138, only including SNVs reliably genotyped in all 4 samples, and identified at least in 4 reads. See Material and Methods for details. (XLS 29 kb)

Authors

  • Acar, Ömer ;
  • Özkurt, Ezgi ;
  • Gulfem Demir ;
  • Saraç, Hilal ;
  • Alkan, Can ;
  • Tarık Esen ;
  • Somel, Mehmet ;
  • Lack, Nathan
1 Citation0 Mentions85% FAIR1.0 Dataset Index
10.6084/m9.figshare.c.3616820_d32015

Additional file 7: Table S4. of Determining the origin of synchronous multifocal bladder cancer by exome sequencing

Odd’s ratio and Fisher’s exact test p-values for a frequency difference between SNVs shared among all tumours and SNVs shared among all samples, with respect to dinucleotide context and resulting mutations. The table includes results for Patients 1 and 2. Bold lines show significant results with odd’s ratio > 1. (XLS 24 kb)

Authors

  • Acar, Ömer ;
  • Özkurt, Ezgi ;
  • Gulfem Demir ;
  • Saraç, Hilal ;
  • Alkan, Can ;
  • Tarık Esen ;
  • Somel, Mehmet ;
  • Lack, Nathan
1 Citation0 Mentions85% FAIR1.0 Dataset Index
10.6084/m9.figshare.c.3616820_d52015

Additional file 6: Table S2. of Determining the origin of synchronous multifocal bladder cancer by exome sequencing

Potential driver mutations in samples identified from COSMIC or ATLAS databases and literature. (XLS 33 kb)

Authors

  • Acar, Ömer ;
  • Özkurt, Ezgi ;
  • Gulfem Demir ;
  • Saraç, Hilal ;
  • Alkan, Can ;
  • Tarık Esen ;
  • Somel, Mehmet ;
  • Lack, Nathan
1 Citation0 Mentions85% FAIR1.0 Dataset Index
10.6084/m9.figshare.c.3616820_d72015

Additional file 6: Table S2. of Determining the origin of synchronous multifocal bladder cancer by exome sequencing

Potential driver mutations in samples identified from COSMIC or ATLAS databases and literature. (XLS 33 kb)

Authors

  • Acar, Ömer ;
  • Özkurt, Ezgi ;
  • Gulfem Demir ;
  • Saraç, Hilal ;
  • Alkan, Can ;
  • Tarık Esen ;
  • Somel, Mehmet ;
  • Lack, Nathan
1 Citation0 Mentions85% FAIR1.0 Dataset Index
10.6084/m9.figshare.c.3616820_d7.v12015

Additional file 7: Table S4. of Determining the origin of synchronous multifocal bladder cancer by exome sequencing

Odd’s ratio and Fisher’s exact test p-values for a frequency difference between SNVs shared among all tumours and SNVs shared among all samples, with respect to dinucleotide context and resulting mutations. The table includes results for Patients 1 and 2. Bold lines show significant results with odd’s ratio > 1. (XLS 24 kb)

Authors

  • Acar, Ömer ;
  • Özkurt, Ezgi ;
  • Gulfem Demir ;
  • Saraç, Hilal ;
  • Alkan, Can ;
  • Tarık Esen ;
  • Somel, Mehmet ;
  • Lack, Nathan
1 Citation0 Mentions85% FAIR1.0 Dataset Index
10.6084/m9.figshare.c.3616820_d5.v12015

Additional file 1: Table S1. of Determining the origin of synchronous multifocal bladder cancer by exome sequencing

Number of reads and number of detected SNVs and indels. Cov: coverage. The strict filtering criteria include the GATK quality score (“PASS”), excluding segmental duplications, removing SNVs included in dbSNPv.138, only including SNVs reliably genotyped in all 4 samples, and identified at least in 4 reads. See Material and Methods for details. (XLS 29 kb)

Authors

  • Acar, Ömer ;
  • Özkurt, Ezgi ;
  • Gulfem Demir ;
  • Saraç, Hilal ;
  • Alkan, Can ;
  • Tarık Esen ;
  • Somel, Mehmet ;
  • Lack, Nathan
1 Citation0 Mentions85% FAIR0.9 Dataset Index
10.6084/m9.figshare.c.3616820_d3.v12015

Additional file 3: Table S3. of Determining the origin of synchronous multifocal bladder cancer by exome sequencing

Odd’s ratio and Fisher’s exact test p-values for a frequency difference between SNVs shared among all tumours and SNVs shared among all samples, with respect to dinucleotide context and trinucleotide context. The table includes results for Patients 1 and 2. Bold lines show significant results with odd’s ratio > 1. (XLS 25 kb)

Authors

  • Acar, Ömer ;
  • Özkurt, Ezgi ;
  • Gulfem Demir ;
  • Saraç, Hilal ;
  • Alkan, Can ;
  • Tarık Esen ;
  • Somel, Mehmet ;
  • Lack, Nathan
1 Citation0 Mentions85% FAIR0.9 Dataset Index
10.6084/m9.figshare.c.3616820_d2.v12015

Additional file 8: Table S5. of Determining the origin of synchronous multifocal bladder cancer by exome sequencing

Odd’s ratio and Fisher’s exact test p-values for a frequency difference between SNVs shared among all tumours and SNVs found private to tumours, with respect to dinucleotide context. The table includes results for Patients 1 and 2. Bold lines show significant results with odd’s ratio > 1. (XLS 20 kb)

Authors

  • Acar, Ömer ;
  • Özkurt, Ezgi ;
  • Gulfem Demir ;
  • Saraç, Hilal ;
  • Alkan, Can ;
  • Tarık Esen ;
  • Somel, Mehmet ;
  • Lack, Nathan
1 Citation0 Mentions85% FAIR1.0 Dataset Index
10.6084/m9.figshare.c.3616820_d1.v12015