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Automated Author Profile

Sadreyev, Ruslan

Current S-Index

16.9

Sum of Dataset Indices for all datasets

Average Dataset Index per Dataset

0.8

Average Dataset Index per dataset

Total Datasets

22

Total datasets for this author

Average FAIR Score

83.3%

Average FAIR Score per dataset

Total Citations

18

Total citations to the author's datasets

Total Mentions

0

Total mentions of the author's datasets

S-Index Interpretation

S-Index Over Time

Cumulative Citations Over Time

Cumulative Mentions Over Time

Datasets

Additional file 2 of A post-transcriptional program of chemoresistance by AU-rich elements and TTP in quiescent leukemic cells

Table S1. Related to main Figs. 1, 2, 3, 4, 5, 6, 7 and 8. RNAs up-regulated at the translatome level and their RO changes in G0 cells induced by SS or AraC.

Authors

  • Sooncheol Lee ;
  • Micalizzi, Douglas ;
  • Truesdell, Samuel ;
  • Bukhari, Syed ;
  • Boukhali, Myriam ;
  • Lombardi-Story, Jennifer ;
  • Kato, Yasutaka ;
  • Choo, Min-Kyung ;
  • Ipsita Dey-Guha ;
  • Ji, Fei ;
  • Nicholson, Benjamin ;
  • Myers, David ;
  • Dongjun Lee ;
  • Mazzola, Maria ;
  • Raheja, Radhika ;
  • Langenbucher, Adam ;
  • Haradhvala, Nicholas ;
  • Lawrence, Michael ;
  • Roopali Gandhi ;
  • Tiedje, Christopher ;
  • Diaz-MuñOz, Manuel D. ;
  • Sweetser, David ;
  • Sadreyev, Ruslan ;
  • Sykes, David ;
  • Haas, Wilhelm ;
  • Haber, Daniel ;
  • Maheswaran, Shyamala ;
  • Vasudevan, Shobha
0 Citations0 Mentions85% FAIR0.5 Dataset Index
10.6084/m9.figshare.118342742020

Additional file 2 of A post-transcriptional program of chemoresistance by AU-rich elements and TTP in quiescent leukemic cells

Table S1. Related to main Figs. 1, 2, 3, 4, 5, 6, 7 and 8. RNAs up-regulated at the translatome level and their RO changes in G0 cells induced by SS or AraC.

Authors

  • Sooncheol Lee ;
  • Micalizzi, Douglas ;
  • Truesdell, Samuel ;
  • Bukhari, Syed ;
  • Boukhali, Myriam ;
  • Lombardi-Story, Jennifer ;
  • Kato, Yasutaka ;
  • Choo, Min-Kyung ;
  • Ipsita Dey-Guha ;
  • Ji, Fei ;
  • Nicholson, Benjamin ;
  • Myers, David ;
  • Dongjun Lee ;
  • Mazzola, Maria ;
  • Raheja, Radhika ;
  • Langenbucher, Adam ;
  • Haradhvala, Nicholas ;
  • Lawrence, Michael ;
  • Roopali Gandhi ;
  • Tiedje, Christopher ;
  • Diaz-MuñOz, Manuel D. ;
  • Sweetser, David ;
  • Sadreyev, Ruslan ;
  • Sykes, David ;
  • Haas, Wilhelm ;
  • Haber, Daniel ;
  • Maheswaran, Shyamala ;
  • Vasudevan, Shobha
0 Citations0 Mentions85% FAIR0.5 Dataset Index
10.6084/m9.figshare.11834274.v12020

Additional file 3 of A post-transcriptional program of chemoresistance by AU-rich elements and TTP in quiescent leukemic cells

Table S2. Related to main Figs. 1, 2, 3, 4, 5, 6, 7 and 8. RNAs bearing AU-rich elements (AREs) and up-regulated at the translatome level in G0 cells induced by SS or AraC.

Authors

  • Sooncheol Lee ;
  • Micalizzi, Douglas ;
  • Truesdell, Samuel ;
  • Bukhari, Syed ;
  • Boukhali, Myriam ;
  • Lombardi-Story, Jennifer ;
  • Kato, Yasutaka ;
  • Choo, Min-Kyung ;
  • Ipsita Dey-Guha ;
  • Ji, Fei ;
  • Nicholson, Benjamin ;
  • Myers, David ;
  • Dongjun Lee ;
  • Mazzola, Maria ;
  • Raheja, Radhika ;
  • Langenbucher, Adam ;
  • Haradhvala, Nicholas ;
  • Lawrence, Michael ;
  • Roopali Gandhi ;
  • Tiedje, Christopher ;
  • Diaz-MuñOz, Manuel D. ;
  • Sweetser, David ;
  • Sadreyev, Ruslan ;
  • Sykes, David ;
  • Haas, Wilhelm ;
  • Haber, Daniel ;
  • Maheswaran, Shyamala ;
  • Vasudevan, Shobha
0 Citations0 Mentions85% FAIR0.5 Dataset Index
10.6084/m9.figshare.118342862020

Additional file 3 of A post-transcriptional program of chemoresistance by AU-rich elements and TTP in quiescent leukemic cells

Table S2. Related to main Figs. 1, 2, 3, 4, 5, 6, 7 and 8. RNAs bearing AU-rich elements (AREs) and up-regulated at the translatome level in G0 cells induced by SS or AraC.

Authors

  • Sooncheol Lee ;
  • Micalizzi, Douglas ;
  • Truesdell, Samuel ;
  • Bukhari, Syed ;
  • Boukhali, Myriam ;
  • Lombardi-Story, Jennifer ;
  • Kato, Yasutaka ;
  • Choo, Min-Kyung ;
  • Ipsita Dey-Guha ;
  • Ji, Fei ;
  • Nicholson, Benjamin ;
  • Myers, David ;
  • Dongjun Lee ;
  • Mazzola, Maria ;
  • Raheja, Radhika ;
  • Langenbucher, Adam ;
  • Haradhvala, Nicholas ;
  • Lawrence, Michael ;
  • Roopali Gandhi ;
  • Tiedje, Christopher ;
  • Diaz-MuñOz, Manuel D. ;
  • Sweetser, David ;
  • Sadreyev, Ruslan ;
  • Sykes, David ;
  • Haas, Wilhelm ;
  • Haber, Daniel ;
  • Maheswaran, Shyamala ;
  • Vasudevan, Shobha
0 Citations0 Mentions56% FAIR0.3 Dataset Index
10.6084/m9.figshare.11834286.v12020

Additional file 10: Table S6. of Tribbles ortholog NIPI-3 and bZIP transcription factor CEBP-1 regulate a Caenorhabditis elegans intestinal immune surveillance pathway

Proteins misregulated in nipi-3(fr4) or pmk-1(km25) as compared to wild type worms. This table lists the proteins differentially expressed in wild type N2 and nipi-3(fr4) animals fed BL21 control bacteria (first tab) or E. coli expressing ToxA (second tab) for 24Â hours. This table also lists the proteins differentially expressed in wild type N2 and pmk-1(km25) animals fed E. coli expressing ToxA for 24Â hours (third tab). Relative expression levels are an average of two independent replicates. Primary data are provided in Additional file 8. (XLSX 29 kb)

Authors

  • McEwan, Deborah ;
  • Feinbaum, Rhonda ;
  • Stroustrup, Nicholas ;
  • Haas, Wilhelm ;
  • Conery, Annie ;
  • Anselmo, Anthony ;
  • Sadreyev, Ruslan ;
  • Ausubel, Frederick
1 Citation0 Mentions85% FAIR0.9 Dataset Index
10.6084/m9.figshare.c.3621044_d82016

Additional file 1: Table S1. of Tribbles ortholog NIPI-3 and bZIP transcription factor CEBP-1 regulate a Caenorhabditis elegans intestinal immune surveillance pathway

Testing whether ToxA-responsive genes defend against ToxA. This table lists the genes that were previously found to be significantly induced by E. coli expressing ToxA [5] and were inhibited either by RNAi or with mutant alleles to determine whether they are necessary for ToxA resistance. (XLSX 15 kb)

Authors

  • McEwan, Deborah ;
  • Feinbaum, Rhonda ;
  • Stroustrup, Nicholas ;
  • Haas, Wilhelm ;
  • Conery, Annie ;
  • Anselmo, Anthony ;
  • Sadreyev, Ruslan ;
  • Ausubel, Frederick
1 Citation0 Mentions85% FAIR0.7 Dataset Index
10.6084/m9.figshare.c.3621044_d102016

Additional file 15: of Tribbles ortholog NIPI-3 and bZIP transcription factor CEBP-1 regulate a Caenorhabditis elegans intestinal immune surveillance pathway

Primary data for Figs. 1b and 3b, Figures S3a, b, and S7b, and Tables S3 and S4. (XLSX 35 kb)

Authors

  • McEwan, Deborah ;
  • Feinbaum, Rhonda ;
  • Stroustrup, Nicholas ;
  • Haas, Wilhelm ;
  • Conery, Annie ;
  • Anselmo, Anthony ;
  • Sadreyev, Ruslan ;
  • Ausubel, Frederick
1 Citation0 Mentions85% FAIR0.7 Dataset Index
10.6084/m9.figshare.c.3621044_d112016

Additional file 4: Table S3. of Tribbles ortholog NIPI-3 and bZIP transcription factor CEBP-1 regulate a Caenorhabditis elegans intestinal immune surveillance pathway

NanoString analysis of wild type N2 and nipi-3(fr4) gene expression. This table lists the gene expression fold changes between wild type N2 and nipi-3(fr4) animals fed P. aeruginosa PA14 or control OP50 E. coli for 6Â hours (first tab) or fed E. coli expressing ToxA or BL21 control for 24Â hours (second tab). Expression values are the average of three (PA14 and OP50) or two (ToxA and BL21 control) independent replicates and normalized to three control genes. Primary data are provided in Additional file 15. (XLSX 33 kb)

Authors

  • McEwan, Deborah ;
  • Feinbaum, Rhonda ;
  • Stroustrup, Nicholas ;
  • Haas, Wilhelm ;
  • Conery, Annie ;
  • Anselmo, Anthony ;
  • Sadreyev, Ruslan ;
  • Ausubel, Frederick
1 Citation0 Mentions85% FAIR0.9 Dataset Index
10.6084/m9.figshare.c.3621044_d142016

Additional file 1: Table S1. of Influence of maternal breast milk ingestion on acquisition of the intestinal microbiome in preterm infants

Per sample key metadata parameters. Table S2. Per sample Shannon diversity indices. Table S3. Mean taxa relative abundance values by postnatal time and birth weight class. Table S4. Mean taxa relative abundance values by birth weight class alone. (XLS 106 kb)

Authors

  • Gregory, Katherine ;
  • Samuel, Buck ;
  • Houghteling, Pearl ;
  • Guru Shan ;
  • Ausubel, Frederick ;
  • Sadreyev, Ruslan ;
  • W. Walker
1 Citation0 Mentions85% FAIR0.8 Dataset Index
10.6084/m9.figshare.c.3654740_d22016

Additional file 1: Table S1. of Influence of maternal breast milk ingestion on acquisition of the intestinal microbiome in preterm infants

Per sample key metadata parameters. Table S2. Per sample Shannon diversity indices. Table S3. Mean taxa relative abundance values by postnatal time and birth weight class. Table S4. Mean taxa relative abundance values by birth weight class alone. (XLS 106 kb)

Authors

  • Gregory, Katherine ;
  • Samuel, Buck ;
  • Houghteling, Pearl ;
  • Guru Shan ;
  • Ausubel, Frederick ;
  • Sadreyev, Ruslan ;
  • W. Walker
1 Citation0 Mentions85% FAIR1.0 Dataset Index
10.6084/m9.figshare.c.3654740_d2.v12016