Automated Author Profile

Jager, Victor De

Current S-Index

9.5

Sum of Dataset Indices for all datasets

Average Dataset Index per Dataset

0.8

Average Dataset Index per dataset

Total Datasets

12

Total datasets for this author

Average FAIR Score

84.6%

Average FAIR Score per dataset

Total Citations

12

Total citations to the author's datasets

Total Mentions

0

Total mentions of the author's datasets

S-Index Interpretation

S-Index Over Time

Cumulative Citations Over Time

Cumulative Mentions Over Time

Datasets

Additional file 4: of Recent and dynamic transposable elements contribute to genomic divergence under asexuality

Statistical analyses of the relative abundance of TE classes between accessions, as estimated by read counts, at three hierarchical levels of annotation (Likelihood Ratio Chi-square test). (XLSX 9Â kb)

Authors

  • Carvalho, Julie Ferreira De ;
  • Jager, Victor De ;
  • Gurp, Thomas Van ;
  • Wagemaker, Niels ;
  • Verhoeven, Koen
1 Citation0 Mentions85% FAIR0.7 Dataset Index
10.6084/m9.figshare.c.3641036_d6.v12016

Additional file 3: of Recent and dynamic transposable elements contribute to genomic divergence under asexuality

Intra-family heterogeneity of most abundant TE families in the genomes of the five accessions of T. officinale. Number of clusters are presented for each model described in the method section. (XLSX 9Â kb)

Authors

  • Carvalho, Julie Ferreira De ;
  • Jager, Victor De ;
  • Gurp, Thomas Van ;
  • Wagemaker, Niels ;
  • Verhoeven, Koen
1 Citation0 Mentions85% FAIR0.5 Dataset Index
10.6084/m9.figshare.c.3641036_d5.v12016

Additional file 5: of Recent and dynamic transposable elements contribute to genomic divergence under asexuality

Number of clusters, genomic abundance and proportions of most abundant transposable elements classified according to Wicker et al. [1] in the five accessions of T. officinale apomictic lineage. (XLSX 13Â kb)

Authors

  • Carvalho, Julie Ferreira De ;
  • Jager, Victor De ;
  • Gurp, Thomas Van ;
  • Wagemaker, Niels ;
  • Verhoeven, Koen
1 Citation0 Mentions85% FAIR1.3 Dataset Index
10.6084/m9.figshare.c.3641036_d4.v12016

Additional file 5: of Recent and dynamic transposable elements contribute to genomic divergence under asexuality

Number of clusters, genomic abundance and proportions of most abundant transposable elements classified according to Wicker et al. [1] in the five accessions of T. officinale apomictic lineage. (XLSX 13Â kb)

Authors

  • Carvalho, Julie Ferreira De ;
  • Jager, Victor De ;
  • Gurp, Thomas Van ;
  • Wagemaker, Niels ;
  • Verhoeven, Koen
1 Citation0 Mentions85% FAIR0.5 Dataset Index
10.6084/m9.figshare.c.3641036_d42016

Additional file 3: of Recent and dynamic transposable elements contribute to genomic divergence under asexuality

Intra-family heterogeneity of most abundant TE families in the genomes of the five accessions of T. officinale. Number of clusters are presented for each model described in the method section. (XLSX 9Â kb)

Authors

  • Carvalho, Julie Ferreira De ;
  • Jager, Victor De ;
  • Gurp, Thomas Van ;
  • Wagemaker, Niels ;
  • Verhoeven, Koen
1 Citation0 Mentions85% FAIR0.5 Dataset Index
10.6084/m9.figshare.c.3641036_d52016

Additional file 4: of Recent and dynamic transposable elements contribute to genomic divergence under asexuality

Statistical analyses of the relative abundance of TE classes between accessions, as estimated by read counts, at three hierarchical levels of annotation (Likelihood Ratio Chi-square test). (XLSX 9Â kb)

Authors

  • Carvalho, Julie Ferreira De ;
  • Jager, Victor De ;
  • Gurp, Thomas Van ;
  • Wagemaker, Niels ;
  • Verhoeven, Koen
1 Citation0 Mentions85% FAIR0.5 Dataset Index
10.6084/m9.figshare.c.3641036_d62016

Additional file 4: Mass lists of the dried droplet mass spectrometry analyses. of Comparative genomics and metabolic profiling of the genus Lysobacter

(XLSX 610 kb)

Authors

  • Bruijn, Irene De ;
  • Cheng, Xu ;
  • Jager, Victor De ;
  • Expรณsito, Ruth ;
  • Watrous, Jeramie ;
  • Nrupali Patel ;
  • Postma, Joeke ;
  • Dorrestein, Pieter ;
  • Kobayashi, Donald ;
  • Raaijmakers, Jos
1 Citation0 Mentions85% FAIR0.6 Dataset Index
10.6084/m9.figshare.c.3612035_d3.v12015

Additional file 2: Table S1. of Exploring the genomic traits of fungus-feeding bacterial genus Collimonas

Gene locus of the flagellar biosynthetic gene cluster of the Collimonas strains. Table S2. Gene locus of the secretion systems of the Collimonas strains. Table S3. Genomic distribution of signal transduction proteins in six Collimonas genomes. Table S4. Presence of quorum-sensing proteins in six Collimonas genomes. Table S5. Gene locus of the collimomycin biosynthetic gene cluster of the Collimonas strains. Table S6. Gene locus of the chitinase biosynthetic gene clusters of the Collimonas strains. Table S7. Gene locus of the phopholipase genes of the Collimonas strains. Table S8. Antimicrobial activities of the Collimonas strains. Table S9. Genes encoding secondary metabolites and secretion systems in Collimonas strains. Table S10. Strains and mutants used in this study. Table S11. Summary of Illumina paired-end sequences assembly data. Table S12. Summary of PacBio sequences assembly data. Table S13. Sequences of characterized bacterial terpene synthases used in the phylogenetic analysis. (XLSX 56Â kb)

Authors

  • Chunxu Song ;
  • Schmidt, Ruth ;
  • Jager, Victor De ;
  • Krzyzanowska, Dorota ;
  • Esmer Jongedijk ;
  • Cankar, Katarina ;
  • Beekwilder, Jules ;
  • Veen, Anouk Van ;
  • Boer, Wietse De ;
  • Veen, Johannes Van ;
  • Garbeva, Paolina
1 Citation0 Mentions85% FAIR2.4 Dataset Index
10.6084/m9.figshare.c.3623780_d12015

Additional file 3: of Exploring the genomic traits of fungus-feeding bacterial genus Collimonas

The IGS annotation of Collimonas fungivorans Ter331 genome. (GBF 10511Â kb)

Authors

  • Chunxu Song ;
  • Schmidt, Ruth ;
  • Jager, Victor De ;
  • Krzyzanowska, Dorota ;
  • Esmer Jongedijk ;
  • Cankar, Katarina ;
  • Beekwilder, Jules ;
  • Veen, Anouk Van ;
  • Boer, Wietse De ;
  • Veen, Johannes Van ;
  • Garbeva, Paolina
1 Citation0 Mentions85% FAIR0.7 Dataset Index
10.6084/m9.figshare.c.3623780_d22015

Additional file 3: of Exploring the genomic traits of fungus-feeding bacterial genus Collimonas

The IGS annotation of Collimonas fungivorans Ter331 genome. (GBF 10511Â kb)

Authors

  • Chunxu Song ;
  • Schmidt, Ruth ;
  • Jager, Victor De ;
  • Krzyzanowska, Dorota ;
  • Esmer Jongedijk ;
  • Cankar, Katarina ;
  • Beekwilder, Jules ;
  • Veen, Anouk Van ;
  • Boer, Wietse De ;
  • Veen, Johannes Van ;
  • Garbeva, Paolina
1 Citation0 Mentions85% FAIR0.6 Dataset Index
10.6084/m9.figshare.c.3623780_d2.v12015