Automated Author Profile

Long, Mark

Current S-Index

10.6

Sum of Dataset Indices for all datasets

Average Dataset Index per Dataset

0.8

Average Dataset Index per dataset

Total Datasets

14

Total datasets for this author

Average FAIR Score

82.4%

Average FAIR Score per dataset

Total Citations

12

Total citations to the author's datasets

Total Mentions

0

Total mentions of the author's datasets

S-Index Interpretation

S-Index Over Time

Cumulative Citations Over Time

Cumulative Mentions Over Time

Datasets

Advanced Placement Science Impact Study, United States, 2013-2016 (Version: v0)

The AP Science Impact Study, which is funded by the National Science Foundation, seeks to understand the impact of Advanced Placement Biology and Chemistry classes on the high school students who take them. It examines the effects of the updated inquiry-based curriculum on students' confidence in scientific inquiry skills and their post-high school plans, including college type, selectivity, and major. This study has policy implications for science curriculum and the next generation STEM workforce. For more information, see https://evans.uw.edu/ap-science-impact-study

Authors

  • Long, Mark ;
  • Conger, Dylan ;
  • McGhee, Raymond
1 Citation0 Mentions69% FAIR0.8 Dataset Index
10.3886/icpsr376432020

Advanced Placement Science Impact Study, United States, 2013-2016 (Version: v1)

The AP Science Impact Study, which is funded by the National Science Foundation, seeks to understand the impact of Advanced Placement Biology and Chemistry classes on the high school students who take them. It examines the effects of the updated inquiry-based curriculum on students' confidence in scientific inquiry skills and their post-high school plans, including college type, selectivity, and major. This study has policy implications for science curriculum and the next generation STEM workforce. For more information, see https://evans.uw.edu/ap-science-impact-study

Authors

  • Long, Mark ;
  • Conger, Dylan ;
  • McGhee, Raymond
0 Citations0 Mentions69% FAIR0.4 Dataset Index
10.3886/icpsr37643.v12020

Additional file 12: of Efficient identification of neoantigen-specific T-cell responses in advanced human ovarian cancer

Table S1. Clinical demographics of treatment-naĂŻve (including both chemotherapy and immunotherapy) epithelial ovarian cancer patients at the time of primary debulking surgery. Patient identification number, age at diagnosis, tumor histologic type, FIGO stage, debulking status, residual tumor mass after debulking surgery, number of recurrences after primary debulking surgery, and RECIST to frontline chemotherapy after primary debulking surgery. (XLSX 10 kb)

Authors

  • Liu, Song ;
  • Matsuzaki, Junko ;
  • Wei, Lei ;
  • Tsuji, Takemasa ;
  • Battaglia, Sebastiano ;
  • Hu, Qiang ;
  • Cortes, Eduardo ;
  • Wong, Laiping ;
  • Yan, Li ;
  • Long, Mark ;
  • Miliotto, Anthony ;
  • Bateman, Nicholas ;
  • Lele, Shashikant ;
  • Chodon, Thinle ;
  • Koya, Richard ;
  • Yao, Song ;
  • Zhu, Qianqian ;
  • Conrads, Thomas ;
  • Wang, Jianmin ;
  • Maxwell, George ;
  • Lugade, Amit ;
  • Odunsi, Kunle
1 Citation0 Mentions85% FAIR0.8 Dataset Index
10.6084/m9.figshare.8305016.v12019

Additional file 13: of Efficient identification of neoantigen-specific T-cell responses in advanced human ovarian cancer

Table S2. Somatic point mutations identified from whole-exome sequencing. (a) The 18 patients with either primary tumor or locally invasive tumor; (b) The 2 patients with both primary tumor and locally invasive tumor. AA, amino acid; CGC, cancer gene census; VAF, variant allele frequency. (XLSX 244 kb)

Authors

  • Liu, Song ;
  • Matsuzaki, Junko ;
  • Wei, Lei ;
  • Tsuji, Takemasa ;
  • Battaglia, Sebastiano ;
  • Hu, Qiang ;
  • Cortes, Eduardo ;
  • Wong, Laiping ;
  • Yan, Li ;
  • Long, Mark ;
  • Miliotto, Anthony ;
  • Bateman, Nicholas ;
  • Lele, Shashikant ;
  • Chodon, Thinle ;
  • Koya, Richard ;
  • Yao, Song ;
  • Zhu, Qianqian ;
  • Conrads, Thomas ;
  • Wang, Jianmin ;
  • Maxwell, George ;
  • Lugade, Amit ;
  • Odunsi, Kunle
1 Citation0 Mentions85% FAIR0.8 Dataset Index
10.6084/m9.figshare.83050192019

Additional file 13: of Efficient identification of neoantigen-specific T-cell responses in advanced human ovarian cancer

Table S2. Somatic point mutations identified from whole-exome sequencing. (a) The 18 patients with either primary tumor or locally invasive tumor; (b) The 2 patients with both primary tumor and locally invasive tumor. AA, amino acid; CGC, cancer gene census; VAF, variant allele frequency. (XLSX 244 kb)

Authors

  • Liu, Song ;
  • Matsuzaki, Junko ;
  • Wei, Lei ;
  • Tsuji, Takemasa ;
  • Battaglia, Sebastiano ;
  • Hu, Qiang ;
  • Cortes, Eduardo ;
  • Wong, Laiping ;
  • Yan, Li ;
  • Long, Mark ;
  • Miliotto, Anthony ;
  • Bateman, Nicholas ;
  • Lele, Shashikant ;
  • Chodon, Thinle ;
  • Koya, Richard ;
  • Yao, Song ;
  • Zhu, Qianqian ;
  • Conrads, Thomas ;
  • Wang, Jianmin ;
  • Maxwell, George ;
  • Lugade, Amit ;
  • Odunsi, Kunle
1 Citation0 Mentions85% FAIR0.7 Dataset Index
10.6084/m9.figshare.8305019.v12019

Additional file 14: of Efficient identification of neoantigen-specific T-cell responses in advanced human ovarian cancer

Table S3. Somatic mutation burdens and predicted neoantigen load in the 20 patients. The predicted neoantigens are classified as expressed or non-expressed based on the mutant alleleâ s expression level in RNAseq data (see Method section). (XLSX 10 kb)

Authors

  • Liu, Song ;
  • Matsuzaki, Junko ;
  • Wei, Lei ;
  • Tsuji, Takemasa ;
  • Battaglia, Sebastiano ;
  • Hu, Qiang ;
  • Cortes, Eduardo ;
  • Wong, Laiping ;
  • Yan, Li ;
  • Long, Mark ;
  • Miliotto, Anthony ;
  • Bateman, Nicholas ;
  • Lele, Shashikant ;
  • Chodon, Thinle ;
  • Koya, Richard ;
  • Yao, Song ;
  • Zhu, Qianqian ;
  • Conrads, Thomas ;
  • Wang, Jianmin ;
  • Maxwell, George ;
  • Lugade, Amit ;
  • Odunsi, Kunle
1 Citation0 Mentions85% FAIR0.8 Dataset Index
10.6084/m9.figshare.83050282019

Additional file 15: of Efficient identification of neoantigen-specific T-cell responses in advanced human ovarian cancer

Table S4. Description of the 75 neopeptides screened for immunogenicity. The expression status is based on the mutant alleleâ s expression level in RNAseq data, and affinity score is predicted by NetMHC algorithm with default setting (see Method section). (XLSX 15 kb)

Authors

  • Liu, Song ;
  • Matsuzaki, Junko ;
  • Wei, Lei ;
  • Tsuji, Takemasa ;
  • Battaglia, Sebastiano ;
  • Hu, Qiang ;
  • Cortes, Eduardo ;
  • Wong, Laiping ;
  • Yan, Li ;
  • Long, Mark ;
  • Miliotto, Anthony ;
  • Bateman, Nicholas ;
  • Lele, Shashikant ;
  • Chodon, Thinle ;
  • Koya, Richard ;
  • Yao, Song ;
  • Zhu, Qianqian ;
  • Conrads, Thomas ;
  • Wang, Jianmin ;
  • Maxwell, George ;
  • Lugade, Amit ;
  • Odunsi, Kunle
1 Citation0 Mentions85% FAIR0.8 Dataset Index
10.6084/m9.figshare.83050312019

Additional file 15: of Efficient identification of neoantigen-specific T-cell responses in advanced human ovarian cancer

Table S4. Description of the 75 neopeptides screened for immunogenicity. The expression status is based on the mutant alleleâ s expression level in RNAseq data, and affinity score is predicted by NetMHC algorithm with default setting (see Method section). (XLSX 15 kb)

Authors

  • Liu, Song ;
  • Matsuzaki, Junko ;
  • Wei, Lei ;
  • Tsuji, Takemasa ;
  • Battaglia, Sebastiano ;
  • Hu, Qiang ;
  • Cortes, Eduardo ;
  • Wong, Laiping ;
  • Yan, Li ;
  • Long, Mark ;
  • Miliotto, Anthony ;
  • Bateman, Nicholas ;
  • Lele, Shashikant ;
  • Chodon, Thinle ;
  • Koya, Richard ;
  • Yao, Song ;
  • Zhu, Qianqian ;
  • Conrads, Thomas ;
  • Wang, Jianmin ;
  • Maxwell, George ;
  • Lugade, Amit ;
  • Odunsi, Kunle
1 Citation0 Mentions85% FAIR0.9 Dataset Index
10.6084/m9.figshare.8305031.v12019

Additional file 16: of Efficient identification of neoantigen-specific T-cell responses in advanced human ovarian cancer

Table S5. The list of 31 genes within the derived APPM signature (see Method section). (XLSX 11 kb)

Authors

  • Liu, Song ;
  • Matsuzaki, Junko ;
  • Wei, Lei ;
  • Tsuji, Takemasa ;
  • Battaglia, Sebastiano ;
  • Hu, Qiang ;
  • Cortes, Eduardo ;
  • Wong, Laiping ;
  • Yan, Li ;
  • Long, Mark ;
  • Miliotto, Anthony ;
  • Bateman, Nicholas ;
  • Lele, Shashikant ;
  • Chodon, Thinle ;
  • Koya, Richard ;
  • Yao, Song ;
  • Zhu, Qianqian ;
  • Conrads, Thomas ;
  • Wang, Jianmin ;
  • Maxwell, George ;
  • Lugade, Amit ;
  • Odunsi, Kunle
1 Citation0 Mentions85% FAIR0.8 Dataset Index
10.6084/m9.figshare.83050432019

Additional file 16: of Efficient identification of neoantigen-specific T-cell responses in advanced human ovarian cancer

Table S5. The list of 31 genes within the derived APPM signature (see Method section). (XLSX 11 kb)

Authors

  • Liu, Song ;
  • Matsuzaki, Junko ;
  • Wei, Lei ;
  • Tsuji, Takemasa ;
  • Battaglia, Sebastiano ;
  • Hu, Qiang ;
  • Cortes, Eduardo ;
  • Wong, Laiping ;
  • Yan, Li ;
  • Long, Mark ;
  • Miliotto, Anthony ;
  • Bateman, Nicholas ;
  • Lele, Shashikant ;
  • Chodon, Thinle ;
  • Koya, Richard ;
  • Yao, Song ;
  • Zhu, Qianqian ;
  • Conrads, Thomas ;
  • Wang, Jianmin ;
  • Maxwell, George ;
  • Lugade, Amit ;
  • Odunsi, Kunle
1 Citation0 Mentions85% FAIR0.9 Dataset Index
10.6084/m9.figshare.8305043.v12019