Automated Author Profile

Chongzhi Zang

Current S-Index

1.9

Sum of Dataset Indices for all datasets

Average Dataset Index per Dataset

0.5

Average Dataset Index per dataset

Total Datasets

4

Total datasets for this author

Average FAIR Score

84.6%

Average FAIR Score per dataset

Total Citations

4

Total citations to the author's datasets

Total Mentions

0

Total mentions of the author's datasets

S-Index Interpretation

S-Index Over Time

Cumulative Citations Over Time

Cumulative Mentions Over Time

Datasets

Additional file 8: File S1. of ChiLin: a comprehensive ChIP-seq and DNase-seq quality control and analysis pipeline

H3K27me3 data QC report from ChiLin. The sequencing reads had been mapped to the mm10 genome build for BWA and Bowtie. File S2. Second H3K27me3 data QC report from ChiLin. The sequencing reads had been mapped to the hg38 genome build for BWA and Bowtie. File S3. H3K4me3 data QC report from ChiLin. The sequencing reads had been mapped to the mm10 genome build for BWA and Bowtie. File S4. Second H3K4me3 data QC report from ChiLin. The sequencing reads had been mapped to the mm10 genome build for BWA and Bowtie. File S5. H2A.Z data QC report from ChiLin. The sequencing reads had been mapped to the mm10 genome build for BWA and Bowtie. File S6. TRRAP data QC report from ChiLin. The sequencing reads had been mapped to the hg38 genome build for BWA and Bowtie. File S7. FOXA1 data QC report from ChiLin. The sequencing reads had been mapped to the hg38 genome build for BWA and Bowtie. File S8. STAT6 data QC report from ChiLin. The sequencing reads had been mapped to the mm10 genome build for BWA and Bowtie. File S9. AR data QC report from ChiLin. This report includes two immunoprecipitated and two input samples. The sequencing reads had been mapped to the hg38 genome build for BWA and Bowtie. File S10. RAD21 paired end data QC report from ChiLin. The sequencing reads had been mapped to the mm10 genome build for BWA and Bowtie. File S11. RAG2 data QC report from ChiLin. The sequencing reads had been mapped to the mm10 genome build for BWA and Bowtie. File S12. CHD7 data QC report from ChiLin. The sequencing reads had been mapped to the mm10 genome build for BWA and Bowtie. File S13. DNase-seq QC report from ChiLin. The sequencing reads had been mapped to the hg38 genome build for BWA and Bowtie. (GZ 9019Â kb)

Authors

  • Qin, Qian ;
  • Shenglin Mei ;
  • Wu, Qiu ;
  • Hanfei Sun ;
  • Lewyn Li ;
  • Taing, Len ;
  • Sujun Chen ;
  • Fugen Li ;
  • Liu, Tao ;
  • Chongzhi Zang ;
  • Xu, Han ;
  • Yiwen Chen ;
  • Meyer, Clifford ;
  • Zhang, Yong ;
  • Brown, Myles ;
  • Long, Henry ;
  • X. Liu
1 Citation0 Mentions85% FAIR0.5 Dataset Index
10.6084/m9.figshare.c.3636644_d32016

Additional file 2: Table S1. of ChiLin: a comprehensive ChIP-seq and DNase-seq quality control and analysis pipeline

Sheet1 ToolsComparison: ChIP-seq pipeline software comparison. Sheet2 Examples of ChiLin report. A summary of example data annotation of transcription factor, chromatin regulatory factor and histone modification ChIP-seq data. Sheet3 Protein classification standard for the 8 categories. Sheet4 Protein classification results. Sheet5 BWA QC Database. ChiLin samples and datasets quality metrics across three layers. A clean up table of cistrome samples and datasets quality metrics for ChiLin usersâ reference. The QC results is based on the reference of hg38 and mm10 assembly. (XLSX 10363Â kb)

Authors

  • Qin, Qian ;
  • Shenglin Mei ;
  • Wu, Qiu ;
  • Hanfei Sun ;
  • Lewyn Li ;
  • Taing, Len ;
  • Sujun Chen ;
  • Fugen Li ;
  • Liu, Tao ;
  • Chongzhi Zang ;
  • Xu, Han ;
  • Yiwen Chen ;
  • Meyer, Clifford ;
  • Zhang, Yong ;
  • Brown, Myles ;
  • Long, Henry ;
  • X. Liu
1 Citation0 Mentions85% FAIR0.5 Dataset Index
10.6084/m9.figshare.c.3636644_d92016

Additional file 2: Table S1. of ChiLin: a comprehensive ChIP-seq and DNase-seq quality control and analysis pipeline

Sheet1 ToolsComparison: ChIP-seq pipeline software comparison. Sheet2 Examples of ChiLin report. A summary of example data annotation of transcription factor, chromatin regulatory factor and histone modification ChIP-seq data. Sheet3 Protein classification standard for the 8 categories. Sheet4 Protein classification results. Sheet5 BWA QC Database. ChiLin samples and datasets quality metrics across three layers. A clean up table of cistrome samples and datasets quality metrics for ChiLin usersâ reference. The QC results is based on the reference of hg38 and mm10 assembly. (XLSX 10363Â kb)

Authors

  • Qin, Qian ;
  • Shenglin Mei ;
  • Wu, Qiu ;
  • Hanfei Sun ;
  • Lewyn Li ;
  • Taing, Len ;
  • Sujun Chen ;
  • Fugen Li ;
  • Liu, Tao ;
  • Chongzhi Zang ;
  • Xu, Han ;
  • Yiwen Chen ;
  • Meyer, Clifford ;
  • Zhang, Yong ;
  • Brown, Myles ;
  • Long, Henry ;
  • X. Liu
1 Citation0 Mentions85% FAIR0.5 Dataset Index
10.6084/m9.figshare.c.3636644_d9.v12016

Additional file 8: File S1. of ChiLin: a comprehensive ChIP-seq and DNase-seq quality control and analysis pipeline

H3K27me3 data QC report from ChiLin. The sequencing reads had been mapped to the mm10 genome build for BWA and Bowtie. File S2. Second H3K27me3 data QC report from ChiLin. The sequencing reads had been mapped to the hg38 genome build for BWA and Bowtie. File S3. H3K4me3 data QC report from ChiLin. The sequencing reads had been mapped to the mm10 genome build for BWA and Bowtie. File S4. Second H3K4me3 data QC report from ChiLin. The sequencing reads had been mapped to the mm10 genome build for BWA and Bowtie. File S5. H2A.Z data QC report from ChiLin. The sequencing reads had been mapped to the mm10 genome build for BWA and Bowtie. File S6. TRRAP data QC report from ChiLin. The sequencing reads had been mapped to the hg38 genome build for BWA and Bowtie. File S7. FOXA1 data QC report from ChiLin. The sequencing reads had been mapped to the hg38 genome build for BWA and Bowtie. File S8. STAT6 data QC report from ChiLin. The sequencing reads had been mapped to the mm10 genome build for BWA and Bowtie. File S9. AR data QC report from ChiLin. This report includes two immunoprecipitated and two input samples. The sequencing reads had been mapped to the hg38 genome build for BWA and Bowtie. File S10. RAD21 paired end data QC report from ChiLin. The sequencing reads had been mapped to the mm10 genome build for BWA and Bowtie. File S11. RAG2 data QC report from ChiLin. The sequencing reads had been mapped to the mm10 genome build for BWA and Bowtie. File S12. CHD7 data QC report from ChiLin. The sequencing reads had been mapped to the mm10 genome build for BWA and Bowtie. File S13. DNase-seq QC report from ChiLin. The sequencing reads had been mapped to the hg38 genome build for BWA and Bowtie. (GZ 9019Â kb)

Authors

  • Qin, Qian ;
  • Shenglin Mei ;
  • Wu, Qiu ;
  • Hanfei Sun ;
  • Lewyn Li ;
  • Taing, Len ;
  • Sujun Chen ;
  • Fugen Li ;
  • Liu, Tao ;
  • Chongzhi Zang ;
  • Xu, Han ;
  • Yiwen Chen ;
  • Meyer, Clifford ;
  • Zhang, Yong ;
  • Brown, Myles ;
  • Long, Henry ;
  • X. Liu
1 Citation0 Mentions85% FAIR0.5 Dataset Index
10.6084/m9.figshare.c.3636644_d3.v12016