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Automated Author Profile

Oelkers, Karsten

Current S-Index

9.4

Sum of Dataset Indices for all datasets

Average Dataset Index per Dataset

0.9

Average Dataset Index per dataset

Total Datasets

10

Total datasets for this author

Average FAIR Score

56.2%

Average FAIR Score per dataset

Total Citations

10

Total citations to the author's datasets

Total Mentions

0

Total mentions of the author's datasets

S-Index Interpretation

S-Index Over Time

Cumulative Citations Over Time

Cumulative Mentions Over Time

Datasets

Additional file 6: of Generation of an integrated Hieracium genomic and transcriptomic resource enables exploration of small RNA pathways during apomixis initiation

Predicted MIRNA genes in the D18 genome. (TXT 784 kb)

Authors

  • Rabiger, David ;
  • Taylor, Jennifer ;
  • Spriggs, Andrew ;
  • Hand, Melanie ;
  • Henderson, Steven ;
  • Johnson, Susan ;
  • Oelkers, Karsten ;
  • Hrmova, Maria ;
  • Saito, Keisuke ;
  • Suzuki, Go ;
  • Mukai, Yasuhiko ;
  • Carroll, Bernard ;
  • Koltunow, Anna
1 Citation0 Mentions85% FAIR1.3 Dataset Index
10.6084/m9.figshare.c.3645854_d1January 2016

Additional file 3: of Generation of an integrated Hieracium genomic and transcriptomic resource enables exploration of small RNA pathways during apomixis initiation

Supplemental data regarding transcriptome and differential expression analysis. (XLSX 4996 kb)

Authors

  • Rabiger, David ;
  • Taylor, Jennifer ;
  • Spriggs, Andrew ;
  • Hand, Melanie ;
  • Henderson, Steven ;
  • Johnson, Susan ;
  • Oelkers, Karsten ;
  • Hrmova, Maria ;
  • Saito, Keisuke ;
  • Suzuki, Go ;
  • Mukai, Yasuhiko ;
  • Carroll, Bernard ;
  • Koltunow, Anna
1 Citation0 Mentions85% FAIR1.3 Dataset Index
10.6084/m9.figshare.c.3645854_d2January 2016

Additional file 4: of Generation of an integrated Hieracium genomic and transcriptomic resource enables exploration of small RNA pathways during apomixis initiation

Cloned and consensus HpAGO sequences in fasta format. (TXT 825 kb)

Authors

  • Rabiger, David ;
  • Taylor, Jennifer ;
  • Spriggs, Andrew ;
  • Hand, Melanie ;
  • Henderson, Steven ;
  • Johnson, Susan ;
  • Oelkers, Karsten ;
  • Hrmova, Maria ;
  • Saito, Keisuke ;
  • Suzuki, Go ;
  • Mukai, Yasuhiko ;
  • Carroll, Bernard ;
  • Koltunow, Anna
1 Citation0 Mentions85% FAIR1.3 Dataset Index
10.6084/m9.figshare.c.3645854_d3January 2016

Additional file 5: of Generation of an integrated Hieracium genomic and transcriptomic resource enables exploration of small RNA pathways during apomixis initiation

Supplemental data regarding small RNA analysis. (XLSX 1496 kb)

Authors

  • Rabiger, David ;
  • Taylor, Jennifer ;
  • Spriggs, Andrew ;
  • Hand, Melanie ;
  • Henderson, Steven ;
  • Johnson, Susan ;
  • Oelkers, Karsten ;
  • Hrmova, Maria ;
  • Saito, Keisuke ;
  • Suzuki, Go ;
  • Mukai, Yasuhiko ;
  • Carroll, Bernard ;
  • Koltunow, Anna
1 Citation0 Mentions85% FAIR1.3 Dataset Index
10.6084/m9.figshare.c.3645854_d5January 2016

Additional file 1: Tables S1â S8. of Generation of an integrated Hieracium genomic and transcriptomic resource enables exploration of small RNA pathways during apomixis initiation

Table S1. Summary of sequencing data across all samples. Table S2. Full list of Arabidopsis genes used for sexual pathway analysis. Table S3. Marker analysis in deletion mutants and polyhaploid mapping populations. Table S4. List of predicted AGO, RDR and DCL genes within the D18 genomic assembly. Table S5. Differentially expressed genes between MMC and FM stage ovaries in R35 and D36. Table S6. Enriched GO terms within differentially expressed genes between MMC and FM stage ovaries in R35 and D36. Table S7. List of predicted gene models with complementary small RNA and transcriptome fold changes. Table S8. List of oligonucleotides used in this study. (XLSX 142 kb)

Authors

  • Rabiger, David ;
  • Taylor, Jennifer ;
  • Spriggs, Andrew ;
  • Hand, Melanie ;
  • Henderson, Steven ;
  • Johnson, Susan ;
  • Oelkers, Karsten ;
  • Hrmova, Maria ;
  • Saito, Keisuke ;
  • Suzuki, Go ;
  • Mukai, Yasuhiko ;
  • Carroll, Bernard ;
  • Koltunow, Anna
1 Citation0 Mentions85% FAIR1.3 Dataset Index
10.6084/m9.figshare.c.3645854_d6January 2016

Additional file 1: Tables S1â S8. of Generation of an integrated Hieracium genomic and transcriptomic resource enables exploration of small RNA pathways during apomixis initiation

Table S1. Summary of sequencing data across all samples. Table S2. Full list of Arabidopsis genes used for sexual pathway analysis. Table S3. Marker analysis in deletion mutants and polyhaploid mapping populations. Table S4. List of predicted AGO, RDR and DCL genes within the D18 genomic assembly. Table S5. Differentially expressed genes between MMC and FM stage ovaries in R35 and D36. Table S6. Enriched GO terms within differentially expressed genes between MMC and FM stage ovaries in R35 and D36. Table S7. List of predicted gene models with complementary small RNA and transcriptome fold changes. Table S8. List of oligonucleotides used in this study. (XLSX 142 kb)

Authors

  • Rabiger, David ;
  • Taylor, Jennifer ;
  • Spriggs, Andrew ;
  • Hand, Melanie ;
  • Henderson, Steven ;
  • Johnson, Susan ;
  • Oelkers, Karsten ;
  • Hrmova, Maria ;
  • Saito, Keisuke ;
  • Suzuki, Go ;
  • Mukai, Yasuhiko ;
  • Carroll, Bernard ;
  • Koltunow, Anna
1 Citation0 Mentions13% FAIR0.5 Dataset Index
10.6084/m9.figshare.c.3645854_d6.v1January 2016

Additional file 5: of Generation of an integrated Hieracium genomic and transcriptomic resource enables exploration of small RNA pathways during apomixis initiation

Supplemental data regarding small RNA analysis. (XLSX 1496 kb)

Authors

  • Rabiger, David ;
  • Taylor, Jennifer ;
  • Spriggs, Andrew ;
  • Hand, Melanie ;
  • Henderson, Steven ;
  • Johnson, Susan ;
  • Oelkers, Karsten ;
  • Hrmova, Maria ;
  • Saito, Keisuke ;
  • Suzuki, Go ;
  • Mukai, Yasuhiko ;
  • Carroll, Bernard ;
  • Koltunow, Anna
1 Citation0 Mentions13% FAIR0.5 Dataset Index
10.6084/m9.figshare.c.3645854_d5.v1January 2016

Additional file 4: of Generation of an integrated Hieracium genomic and transcriptomic resource enables exploration of small RNA pathways during apomixis initiation

Cloned and consensus HpAGO sequences in fasta format. (TXT 825 kb)

Authors

  • Rabiger, David ;
  • Taylor, Jennifer ;
  • Spriggs, Andrew ;
  • Hand, Melanie ;
  • Henderson, Steven ;
  • Johnson, Susan ;
  • Oelkers, Karsten ;
  • Hrmova, Maria ;
  • Saito, Keisuke ;
  • Suzuki, Go ;
  • Mukai, Yasuhiko ;
  • Carroll, Bernard ;
  • Koltunow, Anna
1 Citation0 Mentions13% FAIR0.5 Dataset Index
10.6084/m9.figshare.c.3645854_d3.v1January 2016

Additional file 3: of Generation of an integrated Hieracium genomic and transcriptomic resource enables exploration of small RNA pathways during apomixis initiation

Supplemental data regarding transcriptome and differential expression analysis. (XLSX 4996 kb)

Authors

  • Rabiger, David ;
  • Taylor, Jennifer ;
  • Spriggs, Andrew ;
  • Hand, Melanie ;
  • Henderson, Steven ;
  • Johnson, Susan ;
  • Oelkers, Karsten ;
  • Hrmova, Maria ;
  • Saito, Keisuke ;
  • Suzuki, Go ;
  • Mukai, Yasuhiko ;
  • Carroll, Bernard ;
  • Koltunow, Anna
1 Citation0 Mentions13% FAIR0.5 Dataset Index
10.6084/m9.figshare.c.3645854_d2.v1January 2016

Additional file 6: of Generation of an integrated Hieracium genomic and transcriptomic resource enables exploration of small RNA pathways during apomixis initiation

Predicted MIRNA genes in the D18 genome. (TXT 784 kb)

Authors

  • Rabiger, David ;
  • Taylor, Jennifer ;
  • Spriggs, Andrew ;
  • Hand, Melanie ;
  • Henderson, Steven ;
  • Johnson, Susan ;
  • Oelkers, Karsten ;
  • Hrmova, Maria ;
  • Saito, Keisuke ;
  • Suzuki, Go ;
  • Mukai, Yasuhiko ;
  • Carroll, Bernard ;
  • Koltunow, Anna
1 Citation0 Mentions85% FAIR1.3 Dataset Index
10.6084/m9.figshare.c.3645854_d1.v1January 2016