Automated Author Profile

Sommer, Simone

0000-0002-5148-8136

Current S-Index

5.4

Sum of Dataset Indices for all datasets

Average Dataset Index per Dataset

0.9

Average Dataset Index per dataset

Total Datasets

6

Total datasets for this author

Average FAIR Score

34.6%

Average FAIR Score per dataset

Total Citations

2

Total citations to the author's datasets

Total Mentions

0

Total mentions of the author's datasets

S-Index Interpretation

S-Index Over Time

Cumulative Citations Over Time

Cumulative Mentions Over Time

Datasets

Meerkat MHC-TB coevolution, Datasets and Code

Data and code used for the analyses of the manuscript titled "Twenty-year co-evolutionary arms race between meerkat MHC and Tuberculosis".Included files: Sus-DRB.fasta.txt -> Fasta file of nucleotide sequences of MHC-DRB alleles of 1567 successfully MHC-genotpyed meerkats.Allele_NT_sequences: Overview of MHC-DRB alleles of 1567 successfully MHC genotyped meerkats, including all identifiers used for the respective sequence throughout analyses and Figures. Nucloeotide_sequence = raw nucleotide sequence, nucleotide_sequence_modified: Nucleotide sequence without the first Base, as Open Reading Frame of the sequence began on position 2, so first base was excluded prior to further analyses.Metafiles_meerkats_MHC_TB.xls: Detailed information on the variables included in the datasets provided.MHC_TB_R_Script.Rmd: R-Markdown file including the code used for data filtering and analyses for all models run for the manuscript.MHC_summary_year_NFDS: Data used to test for negative frequency dependent selection on MHC allele DRB*13 and the corresponding supertype ST09 and haplotype F. Data on yearly frequency on the respective MHC measure and TB prevalence as well as TB prevalence in the following year and the difference between TB prevalences between following years.MHC_TB_analyses.RData: Workspace including the datasets used for analyses for the manuscript.

Authors

  • Mueller-Klein, Nadine ;
  • Risely, Alice ;
  • Wilhelm, Kerstin ;
  • Riegel, Vanessa ;
  • Clutton-Brock, Tim ;
  • Manser, Marta ;
  • Melville, Dominik ;
  • Sommer, Simone ;
  • Santos, Pablo S. C.
1 Citation0 Mentions13% FAIR0.5 Dataset Index
10.6084/m9.figshare.26172985January 2025

Meerkat MHC-TB coevolution, Datasets and Code

Data and code used for the analyses of the manuscript titled "Twenty-year co-evolutionary arms race between meerkat MHC and Tuberculosis".Included files: Sus-DRB.fasta.txt -> Fasta file of nucleotide sequences of MHC-DRB alleles of 1567 successfully MHC-genotpyed meerkats.Allele_NT_sequences: Overview of MHC-DRB alleles of 1567 successfully MHC genotyped meerkats, including all identifiers used for the respective sequence throughout analyses and Figures. Nucloeotide_sequence = raw nucleotide sequence, nucleotide_sequence_modified: Nucleotide sequence without the first Base, as Open Reading Frame of the sequence began on position 2, so first base was excluded prior to further analyses.Metafiles_meerkats_MHC_TB.xls: Detailed information on the variables included in the datasets provided.MHC_TB_R_Script.Rmd: R-Markdown file including the code used for data filtering and analyses for all models run for the manuscript.MHC_summary_year_NFDS: Data used to test for negative frequency dependent selection on MHC allele DRB*13 and the corresponding supertype ST09 and haplotype F. Data on yearly frequency on the respective MHC measure and TB prevalence as well as TB prevalence in the following year and the difference between TB prevalences between following years.MHC_TB_analyses.RData: Workspace including the datasets used for analyses for the manuscript.

Authors

  • Mueller-Klein, Nadine ;
  • Risely, Alice ;
  • Wilhelm, Kerstin ;
  • Riegel, Vanessa ;
  • Clutton-Brock, Tim ;
  • Manser, Marta ;
  • Melville, Dominik ;
  • Sommer, Simone ;
  • Santos, Pablo S. C.
1 Citation0 Mentions13% FAIR0.7 Dataset Index
10.6084/m9.figshare.26172985.v1January 2025

Supplementary tables from Gut microbiota individuality is contingent on temporal scale and age in wild meerkats

Tables S1-S3

Authors

  • Risely, Alice ;
  • Schmid, Dominik W. ;
  • Müller-Klein, Nadine ;
  • Wilhelm, Kerstin ;
  • Clutton-Brock, Tim H. ;
  • Manser, Marta B. ;
  • Sommer, Simone
0 Citations0 Mentions13% FAIR0.1 Dataset Index
10.6084/m9.figshare.20445192January 2022

Supplementary tables from Gut microbiota individuality is contingent on temporal scale and age in wild meerkats

Tables S1-S3

Authors

  • Risely, Alice ;
  • Schmid, Dominik W. ;
  • Müller-Klein, Nadine ;
  • Wilhelm, Kerstin ;
  • Clutton-Brock, Tim H. ;
  • Manser, Marta B. ;
  • Sommer, Simone
0 Citations0 Mentions13% FAIR0.3 Dataset Index
10.6084/m9.figshare.20445192.v1January 2022

STACKS output

No description available

Authors

  • Schwensow, Nina ;
  • Detering, Harald ;
  • Pederson, Stephen ;
  • Mazzoni, Camila ;
  • Sinclair, Ron ;
  • Peacock, David ;
  • Kovaliski, John ;
  • Cooke, Brian ;
  • Fickel, Joerns ;
  • Sommer, Simone
0 Citations0 Mentions77% FAIR1.9 Dataset Index
10.5061/dryad.nd4dp/1January 2017

PLINK output

No description available

Authors

  • Schwensow, Nina ;
  • Detering, Harald ;
  • Pederson, Stephen ;
  • Mazzoni, Camila ;
  • Sinclair, Ron ;
  • Peacock, David ;
  • Kovaliski, John ;
  • Cooke, Brian ;
  • Fickel, Joerns ;
  • Sommer, Simone
0 Citations0 Mentions77% FAIR1.9 Dataset Index
10.5061/dryad.nd4dp/2January 2017