Version 1.0.0
Mappability .bigwig reference files for hg38/hg19; various read lengths
View DatasetPeneder, Peter
Description
This dataset contains reference mappability .bigwig files for the reference genomes hg38 and hg19, for various read lengths. The files were generated with the GEM library (https://sourceforge.net/projects/gemlibrary/files/gem-library/Binary%20pre-release%203/GEM-binaries-Linux-x86_64-core_i3-20130406-045632.tbz2) using this script (based on this work). The files can be used as input for LIQUORICE (https://liquorice.readthedocs.io) - just select the file that matches your sequencing protocol (i.e. read length) and the reference genome of your mapped .bam files.
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Metrics Over Time
Publication Details
Subfield
Molecular Biology
Field
Biochemistry, Genetics and Molecular Biology
Domain
Life Sciences
Confidence Score
36%
Source
Scholar Data Model
Keywords
mappabilitybioinformaticsLIQUORICE