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Data from: Forward genetic screening for regulators involved in cholesterol synthesis using validation-based insertional mutagenesis

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Jiang, Wei;Tang, Jing-Jie;Miao, Hong-Hua;Qu, Yu-Xiu;Qin, Jie;Xu, Jie;Yang, Jinbo;Li, Bo-Liang;Song, Bao-Liang

Description

Somatic cell genetics is a powerful approach for unraveling the regulatory mechanism of cholesterol metabolism. However, it is difficult to identify the mutant gene(s) due to cells are usually mutagenized chemically or physically. To identify important genes controlling cholesterol biosynthesis, an unbiased forward genetics approach named validation-based insertional mutagenesis (VBIM) system was used to isolate and characterize the 25-hydroxycholesterol (25-HC)-resistant and SR-12813-resisitant mutants. Here we report that five mutant cell lines were isolated. Among which, four sterol-resistant mutants either contain a truncated NH2-terminal domain of sterol regulatory element-binding protein (SREBP)-2 terminating at amino acids (aa) 400, or harbor an overexpressed SREBP cleavage-activating protein (SCAP). Besides, one SR-12813 resistant mutant was identified to contain a truncated COOH-terminal catalytic domain of 3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase). This study demonstrates that the VBIM system can be a powerful tool to screen novel regulatory genes in cholesterol biosynthesis.

Citations (0)

Mentions (0)

Metrics

Dataset Index

0.8

FAIR Score

77%

Citations

1

Mentions

0

Metrics Over Time

Publication Details

DOI

Publisher

Dryad

License

Creative Commons Zero v1.0 Universal

Assigned Domain

Subfield

Physiology

Field

Biochemistry, Genetics and Molecular Biology

Domain

Life Sciences

Confidence Score

55%

Source

Scholar Data Model

Keywords

somatic cell geneticsSREBPforward genetic screenHMG-CoA reductaseVBIMCholesterolSCAP

Normalization Factors

FT

51.92

CTw

1.00

MTw

1.00