Description
Transcriptome assembly of Centella asiatica using the raw data in NCBI (PRJNA642665). We using Trimmomatic v0.39 to filter the raw sequences (LEADING:20, TRAILING:20, SLIDINGWINDOW:4:20 MINLEN:50). And then, using RiboDetector v0.2.4 to remove rRNA sequences. After that, we de novo assembly the sequences using Trinity v2.13.2 software with k-mer 31, min_kmer_cov 2.
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Metrics Over Time
Publication Details
Subfield
Genetics
Field
Biochemistry, Genetics and Molecular Biology
Domain
Life Sciences
Confidence Score
37%
Source
Scholar Data Model
Keywords
60405 Gene Expression (incl. Microarray and other genome-wide approaches)FOS: Biological sciencesGenetics60499 Genetics not elsewhere classified