Published on 01 January 2024

Bacterial bins/MAGs recovered from lichen samples

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Waterworth, Samantha

Description

Bacterial contigs greater than 3000 bp in length were clustered into metagenome-assembled genomes (MAGs) using Autometa (v 2.2.1). All recovered bins were assessed for quality using CheckM2 (v.1.0.2) and taxonomically classified using GTDB-Tk (v.2.3.2) using Release 214 as a reference. A total of 2842 MAGs were recovered of which 339 (11.9%) were of high quality and 1091 (38.4%) were of medium quality per MiMAG reporting standards.

Citations (0)

Mentions (0)

Metrics

Dataset Index

0.3

FAIR Score

13%

Citations

0

Mentions

0

Metrics Over Time

Publication Details

Assigned Domain

Subfield

Nutrition and Dietetics

Field

Nursing

Domain

Health Sciences

Confidence Score

35%

Source

Scholar Data Model

Keywords

BacteriologyMicrobial ecology

Normalization Factors

FT

13.46

CTw

1.00

MTw

1.00