Published on 01 January 2024

CIL:55454, Homo sapiens. In Cell Image Library

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Martin-King, Chloe;Nael, Ali;Ehwerhemuepha, Louis;Calvo, Blake;Gates, Quinn;Janchoi, Jamie;Ornelas, Elisa;Perez, Melissa;Venderby, Andrea;Miklavcic, John;Chang, Peter;Grant, Kenneth

Description

Scan 11_E_TI_E -- The dataset consists of 951 tissue section scans taken from 167 H&E-stained whole slides from 18 pediatric inflammatory bowel disease (IBD) patients. Slide section scans are provided as-is without any initial image pre-processing, normalization, or cropping. Labels are provided at the patient, slide (anatomic site), and section (tissue slice) levels. Each slide is labelled with biopsy site and normal or abnormal classification per the surgical pathology report. Each tissue section scan from an abnormal slide is further classified as normal or abnormal by pathologist. Files may be viewed and annotated using standard, opensource slide-viewing software, such as Aperio ImageScope, OpenSlide​​, TiffSlide, and QuPath​​.

Citations (0)

Mentions (0)

Metrics

Dataset Index

1.0

FAIR Score

42%

Citations

0

Mentions

0

Metrics Over Time

Publication Details

DOI

Publisher

UC San Diego Library Digital Collections

Assigned Domain

Subfield

Pulmonary and Respiratory Medicine

Field

Medicine

Domain

Health Sciences

Confidence Score

58%

Source

Scholar Data Model

Keywords

Domain: Biological sciencesDomain: Biomedical and clinical sciencesPediatric inflammatory bowel diseaseHomo sapiens

Normalization Factors

FT

13.46

CTw

1.00

MTw

1.00