Published on 31 July 2024 |

Version 2024-07-31

Electron microscopy images and morphometric data of SARS-CoV-2 variants in ultrathin plastic sections - Dataset 06 (SARS-CoV-2 Omicron B.1.1.529; BA.2)

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Hoffmann, Tobias;Laue, Michael

Description

Dataset 06 comprises 164 transmission electron microscopy images of extracellular SARS-CoV-2 (isolate Omicron B.1.1.529; BA.2) particles in ultrathin plastic sections (45 nm) through Vero cell cultures. The images were recorded with dimensions of 4112 x 3008 pixels at a pixel size of 0.1641 nm and stored in 16-bit TIF format. It is recommended that an image viewer capable of reading 16-bit images, such as IrfanView, be used to visualize the images. The image files have been size calibrated and can be opened with the correct size calibration using ImageJ or Fiji with the Bioformats importer. A PDF document is provided with the image files, which describes the methods used for the generation of the images. Additionally, an XLSX file is included, offering morphometric particle measurements and the calculated statistical values for their distribution. The dataset was produced as dataset 06 for a comparative morphometric analysis of evolving SARS-CoV-2 variants. Further datasets used for the analysis are available in this repository (see dataset description document).

Citations (1)

Mentions (0)

Metrics

Dataset Index

2.0

FAIR Score

77%

Citations

1

Mentions

0

Metrics Over Time

Publication Details

DOI

Publisher

Zenodo

Assigned Domain

Subfield

Radiology, Nuclear Medicine and Imaging

Field

Medicine

Domain

Health Sciences

Confidence Score

49%

Source

Scholar Data Model

Keywords

Electron microscopyCoronavirusesBiological morphologyStructural biologyComparative morphologyDiagnostic imagingMachine learningRKIOpen Data

Normalization Factors

FT

15.38

CTw

1.00

MTw

1.00