Published on 01 January 2024
Additional file 4 of eSVD-DE: cohort-wide differential expression in single-cell RNA-seq data using exponential-family embeddings
View DatasetLin, Kevin Z.;Qiu, Yixuan;Roeder, Kathryn
Description
Additional file 4. This file contains the analysis of astrocytes, endothelial cells, IN-SST, IN-VIP, layer 2/3, layer 4, layer 5/6, layer 5/6-CC, microglia, oligodendrocytes, and OPC from the Velmeshev dataset (from [21]). It contains the estimated log-fold change after removing confounding effects, the eSVD-DE test statistic, the negative log10 p-value, and Benjamini-Hochberg adjusted p-value, and whether the gene is deemed to be a DE gene.
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Publication Details
Subfield
Plant Science
Field
Agricultural and Biological Sciences
Domain
Life Sciences
Confidence Score
47%
Source
Open Alex
Keywords
GeneticsFOS: Biological sciences