Published on 01 January 2024

Additional file 4 of eSVD-DE: cohort-wide differential expression in single-cell RNA-seq data using exponential-family embeddings

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Lin, Kevin Z.;Qiu, Yixuan;Roeder, Kathryn

Description

Additional file 4. This file contains the analysis of astrocytes, endothelial cells, IN-SST, IN-VIP, layer 2/3, layer 4, layer 5/6, layer 5/6-CC, microglia, oligodendrocytes, and OPC from the Velmeshev dataset (from [21]). It contains the estimated log-fold change after removing confounding effects, the eSVD-DE test statistic, the negative log10 p-value, and Benjamini-Hochberg adjusted p-value, and whether the gene is deemed to be a DE gene.

Citations (0)

Mentions (0)

Metrics

Dataset Index

0.1

FAIR Score

13%

Citations

0

Mentions

0

Metrics Over Time

Publication Details

Assigned Domain

Subfield

Plant Science

Field

Agricultural and Biological Sciences

Domain

Life Sciences

Confidence Score

47%

Source

Open Alex

Keywords

GeneticsFOS: Biological sciences

Normalization Factors

FT

30.77

CTw

1.00

MTw

1.00