Additional file 2 of Microbe-driven elemental cycling enables microbial adaptation to deep-sea ferromanganese nodule sediment fields

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Zhang, Dechao;Li, Xudong;Wu, Yuehong;Xu, Xuewei;Liu, Yanxia;Shi, Benze;Peng, Yujie;Dai, Dadong;Sha, Zhongli;Zheng, Jinshui

Description

Additional file 2: Table S1. Sampling sites and elemental composition of the sediment samples. Table S2. Assembly statistics for the seven sediment samples. Table S3. All identified SGs and their relative abundance across each sample. Table S4. All nonredundant MAGs identified in the study, and associated information. Table S5. The relative abundance of MAGs across each sample. Table S6. Information of TCDB's annotation in the 179 MAGs. Table S7. Information of metal redox annotation in the 179 MAGs. Table S8. The list of proteins involved in iron oxidation and iron reduction. Table S9. The matrix for the presence or absence of CAZymes in the 179 MAGs. Table S10. The proportion of MAGs which contained CAZymes within each phylum. Table S11. The matrix for the presence or absence of enzymes involved in the metabolism of small carbon compounds in the 179 MAGs. Table S12. The matrix for the presence or absence of nitrogen and sulfur metabolic genes in the 179 MAGs. Table S13. Checked annotations involved in metal transport and redox reactions. Table S14. Checked annotations involved in nitrogen and sulfur metabolism.

Citations (1)

Mentions (0)

Metrics

Dataset Index

0.5

FAIR Score

85%

Citations

1

Mentions

0

Metrics Over Time

Publication Details

DOI

Publisher

figshare

Assigned Domain

Subfield

Molecular Biology

Field

Biochemistry, Genetics and Molecular Biology

Domain

Life Sciences

Confidence Score

41%

Source

Scholar Data Model

Keywords

MicrobiologyFOS: Biological sciencesGeochemistryFOS: Earth and related environmental sciences

Normalization Factors

FT

30.77

CTw

1.00

MTw

1.00