Additional file 5 of Long-read assembled metagenomic approaches improve our understanding on metabolic potentials of microbial community in mangrove sediments
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Additional file 5: Dataset S4. Sheet1: Detail information for MAGs belong to Candidatus Cosmopoliota; Sheet2: The metabolic characteristics of Ca. Cosmopoliota, annotated against KEGG database; Sheet3: Detail information of CAZymes encoded in Ca. Cosmopoliota; Abbreviations: GH, glycosidases or glycosyl hydrolases; PL, polysaccharide lyases; CE, carbohydrate esterases; GT, glycosyltransferases; AA, auxiliary activities; CBM, carbohydrate binding modules; Sheet4: Detail information of peptidase encoded in Ca. Cosmopoliota; Abbreviations: Aspartic (A), Cysteine (C), Metallo (M), Mixed (P), Serine (S) and Threonine (T); Sheet5: Gene functions of each MAG annotated by metabolic software; Sheet6: Information of sequences belonging to Ca. Cosmopoliota (identity > 83%) retrieved from GenBank; Sheet7: SRA samples with sequences belonging to Ca. Cosmopoliota (identity > 83%) retrieved from Microbe Atlas Project by MAPseq.
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Cited on 23 August 2023
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Publication Details
Subfield
Molecular Biology
Field
Biochemistry, Genetics and Molecular Biology
Domain
Life Sciences
Confidence Score
48%
Source
Scholar Data Model