Additional file 5 of Long-read assembled metagenomic approaches improve our understanding on metabolic potentials of microbial community in mangrove sediments

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Zhang, Zhi-Feng;Liu, Li-Rui;Pan, Yue-Ping;Pan, Jie;Li, Meng

Description

Additional file 5: Dataset S4. Sheet1: Detail information for MAGs belong to Candidatus Cosmopoliota; Sheet2: The metabolic characteristics of Ca. Cosmopoliota, annotated against KEGG database; Sheet3: Detail information of CAZymes encoded in Ca. Cosmopoliota; Abbreviations: GH, glycosidases or glycosyl hydrolases; PL, polysaccharide lyases; CE, carbohydrate esterases; GT, glycosyltransferases; AA, auxiliary activities; CBM, carbohydrate binding modules; Sheet4: Detail information of peptidase encoded in Ca. Cosmopoliota; Abbreviations: Aspartic (A), Cysteine (C), Metallo (M), Mixed (P), Serine (S) and Threonine (T); Sheet5: Gene functions of each MAG annotated by metabolic software; Sheet6: Information of sequences belonging to Ca. Cosmopoliota (identity > 83%) retrieved from GenBank; Sheet7: SRA samples with sequences belonging to Ca. Cosmopoliota (identity > 83%) retrieved from Microbe Atlas Project by MAPseq.

Citations (1)

Mentions (0)

Metrics

Dataset Index

0.5

FAIR Score

85%

Citations

1

Mentions

0

Metrics Over Time

Publication Details

DOI

Publisher

figshare

Assigned Domain

Subfield

Molecular Biology

Field

Biochemistry, Genetics and Molecular Biology

Domain

Life Sciences

Confidence Score

48%

Source

Scholar Data Model

Keywords

MicrobiologyFOS: Biological sciences

Normalization Factors

FT

30.77

CTw

1.00

MTw

1.00