Additional file 9 of The genome and transcriptome of the snail Biomphalaria sudanica s.l.: immune gene diversification and highly polymorphic genomic regions in an important African vector of Schistosoma mansoni

Additional file 9: Supplementary Table 8. Summary table of the predicted location signals found in the Biomphalaria sudanica protein coding genes using the programs SignalP v6.0 [62] for the identification of Signal Peptides (SP), TargetP v2.0 [63] for the identification of mitochondrial transit peptide (mTP) and SecretomeP v1.0 [64] for proteins putatively secreted through other pathways. In addition to the total number of trans-membrane domains predicted by DeepTMHMM v1.0.13 [131] and the identified InterPro v5.56-89.0 [52] signals. Each isoform was putatively classified into 4 types: Secreted (SP identified or positive result with SecretomeP and no trans-membrane domains), Mitochondrial Cytoplasmatic (mTP identified and no trans-membrane domains), Membrane (SP identified or positive result with SecretomeP and at least one trans-membrane domain), Mitochondrial Membrane (mTP identified and at least one trans-membrane domain). When either an SP or a mTP was identified, its location and probability is included in the column Location Signal Details.