Published on 01 January 2024

Additional file 10 of The genome and transcriptome of the snail Biomphalaria sudanica s.l.: immune gene diversification and highly polymorphic genomic regions in an important African vector of Schistosoma mansoni

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Pennance, Tom;Calvelo, Javier;Tennessen, Jacob A.;Burd, Ryan;Cayton, Jared;Bollmann, Stephanie R.;Blouin, Michael S.;Spaan, Johannie M.;Hoffmann, Federico G.;Ogara, George;Rawago, Fredrick;Andiego, Kennedy;Mulonga, Boaz;Odhiambo, Meredith;Loker, Eric S.;Laidemitt, Martina R.;Lu, Lijun;Iriarte, Andrés;Odiere, Maurice R.;Steinauer, Michelle L.

Description

Additional file 10: Supplementary Table 9. Phylogenetic Hierarchical Orthogroups (HOG) estimated by Orthofinder [68]. For each HOG, detail is provided on their ID, the original Orthogroup ID and the node in the gene tree from which the HOG was determined together with the protein ID for the eight genomes analyzed: B. glabrata strain BB02 (GCF_000457365.2 [5]), B. glabrata strain iBS90 (GCA_025434165.1 [6]), B. glabrata strain iM (GCA_025434175.1 [6]), and the species B. pfeifferi (GCA_030265305.1 [8]), B. straminea (GCA_021533235.1 [7]), with the planorbid snail Bulinus truncatus (GCA_021962125.1 [127]) and the Plakobranchidae Elysia marginata (GCA_019649035.1 [128]).

Citations (1)

Mentions (0)

Metrics

Dataset Index

0.7

FAIR Score

13%

Citations

1

Mentions

0

Metrics Over Time

Publication Details

DOI

Publisher

figshare

Assigned Domain

Subfield

Rheumatology

Field

Medicine

Domain

Health Sciences

Confidence Score

38%

Source

Scholar Data Model

Keywords

GeneticsFOS: Biological sciences

Normalization Factors

FT

13.46

CTw

1.00

MTw

1.00