Additional file 17 of The genome and transcriptome of the snail Biomphalaria sudanica s.l.: immune gene diversification and highly polymorphic genomic regions in an important African vector of Schistosoma mansoni

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Pennance, Tom;Calvelo, Javier;Tennessen, Jacob A.;Burd, Ryan;Cayton, Jared;Bollmann, Stephanie R.;Blouin, Michael S.;Spaan, Johannie M.;Hoffmann, Federico G.;Ogara, George;Rawago, Fredrick;Andiego, Kennedy;Mulonga, Boaz;Odhiambo, Meredith;Loker, Eric S.;Laidemitt, Martina R.;Lu, Lijun;Iriarte, Andrés;Odiere, Maurice R.;Steinauer, Michelle L.

Description

Additional file 17: Supplementary Table 16. Total number of genes included on each of the Fibrinogen-related protein (FREP) and C-type lectin-related protein (CREP) Phylogenetically Hierarchical Orthogroups (HOGs) across the analyzed Biomphalaria speciesgenomes and outgroups (B. glabrata strain BB02 (GCF_000457365.2 [5]), B. glabrata strain iBS90 (GCA_025434165.1 [6]), B. glabrata strain iM (GCA_025434175.1 [6]), and the species B. pfeifferi (GCA_030265305.1 [8]), B. straminea (GCA_021533235.1 [7]), Bulinus truncatus (GCA_021962125.1 [127]) and Elysia marginata (GCA_019649035.1 [128])). For B. sudanica, we specify both the raw counts (i.e. ‘Raw’, all the members of the HOG) and how many of these were selected for the phylogenetic analysis (i.e. ‘Selected’).

Citations (1)

Mentions (0)

Metrics

Dataset Index

0.7

FAIR Score

85%

Citations

1

Mentions

0

Metrics Over Time

Publication Details

Assigned Domain

Subfield

Rheumatology

Field

Medicine

Domain

Health Sciences

Confidence Score

40%

Source

Scholar Data Model

Keywords

GeneticsFOS: Biological sciences

Normalization Factors

FT

13.46

CTw

1.00

MTw

1.00