Additional file 23 of The genome and transcriptome of the snail Biomphalaria sudanica s.l.: immune gene diversification and highly polymorphic genomic regions in an important African vector of Schistosoma mansoni
View DatasetPennance, Tom;Calvelo, Javier;Tennessen, Jacob A.;Burd, Ryan;Cayton, Jared;Bollmann, Stephanie R.;Blouin, Michael S.;Spaan, Johannie M.;Hoffmann, Federico G.;Ogara, George;Rawago, Fredrick;Andiego, Kennedy;Mulonga, Boaz;Odhiambo, Meredith;Loker, Eric S.;Laidemitt, Martina R.;Lu, Lijun;Iriarte, Andrés;Odiere, Maurice R.;Steinauer, Michelle L.
Description
Additional file 23: Supplementary File 1. Complete functional annotation of Biomphalaria sudanica, including 23,598 genes assigned to have an open reading frame (ORF) and therefore predicted protein by TransDecoder.Predict v5.5.0 using the Trinity platform [51], the 2,248 raw RNA genes without predicted proteins predicted by StringTie2 v2.2.1 [50], 919 tRNA’s predicted in tRNAscan-SE 2.0 v2.0.9 [124], and 107 rRNA’s predicted in Barrnap v0.9 (github.com/tseemann/barrnap).
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Cited on 19 February 2024
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Publication Details
Subfield
Molecular Biology
Field
Biochemistry, Genetics and Molecular Biology
Domain
Life Sciences
Confidence Score
48%
Source
Scholar Data Model
Keywords
GeneticsFOS: Biological sciences