Additional file 8 of Proteogenomic characterization of difficult-to-treat breast cancer with tumor cells enriched through laser microdissection

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Raj-Kumar, Praveen-Kumar;Lin, Xiaoying;Liu, Tao;Sturtz, Lori A.;Gritsenko, Marina A.;Petyuk, Vladislav A.;Sagendorf, Tyler J.;Deyarmin, Brenda;Liu, Jianfang;Praveen-Kumar, Anupama;Wang, Guisong;McDermott, Jason E.;Shukla, Anil K.;Moore, Ronald J.;Monroe, Matthew E.;Webb-Robertson, Bobbie-Jo M.;Hooke, Jeffrey A.;Fantacone-Campbell, Leigh;Mostoller, Brad;Kvecher, Leonid;Kane, Jennifer;Melley, Jennifer;Somiari, Stella;Soon-Shiong, Patrick;Smith, Richard D.;Mural, Richard J.;Rodland, Karin D.;Shriver, Craig D.;Kovatich, Albert J.;Hu, Hai

Description

Additional file 8. Table S1. Subtypes and Gene set enrichment analysis. (A) Contingency table comparing PCA-PAM50 and IHC subtypes. (B) Annotation of the differentially expressed genes between LMD and TCGA LumA samples. (C) Gene Set Enrichment Analyses highlight sets of immune-related pathways significantly down-regulated in LMD LumA tumors.

Citations (1)

Mentions (0)

Metrics

Dataset Index

0.5

FAIR Score

85%

Citations

1

Mentions

0

Metrics Over Time

Publication Details

DOI

Publisher

figshare

Assigned Domain

Subfield

Plant Science

Field

Agricultural and Biological Sciences

Domain

Life Sciences

Confidence Score

59%

Source

Open Alex

Keywords

GeneticsFOS: Biological sciences

Normalization Factors

FT

30.77

CTw

1.00

MTw

1.00