Additional file 11 of Systematic single-cell analysis reveals dynamic control of transposable element activity orchestrating the endothelial-to-hematopoietic transition

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Feng, Cong;Tie, Ruxiu;Xin, Saige;Chen, Yuhao;Li, Sida;Chen, Yifan;Hu, Xiaotian;Zhou, Yincong;Liu, Yongjing;Hu, Yueming;Hu, Yanshi;Pan, Hang;Wu, Zexu;Chao, Haoyu;Zhang, Shilong;Ni, Qingyang;Huang, Jinyan;Luo, Wenda;Huang, He;Chen, Ming

Description

Additional file 11: Table S1. Differentially accessible TEs between pre-HECs and VECs/AECs. Table S2. Differentially accessible TEs between pre-HECs and HECs/HSCs. Table S3. Cell type-specific open TEs. Table S4. Closest genes and annotations of differentially accessible peaks in mouse EHT. Table S5. Co-access scores of cell type-specific peak pairs. Table S6. Enriched motifs of TE associated cell type-specific peaks (TEPs). Table S7. Activated TF-target pairs during EHT (TFs are corresponding to TE-related motifs). Table S8. GO enrichment results of cell type-specific network modules of TE-bound TFs and downstream targets.

Citations (1)

Mentions (0)

Metrics

Dataset Index

0.5

FAIR Score

85%

Citations

1

Mentions

0

Metrics Over Time

Publication Details

DOI

Publisher

figshare

Assigned Domain

Subfield

Molecular Biology

Field

Biochemistry, Genetics and Molecular Biology

Domain

Life Sciences

Confidence Score

35%

Source

Scholar Data Model

Keywords

GeneticsFOS: Biological sciences

Normalization Factors

FT

30.77

CTw

1.00

MTw

1.00