Published on 01 January 2016

Diversity and ecology of green microalgae in marine systems: an overview based on 18S rRNA sequences.Perspectives in Phycology. Supplementary material.

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M.Tragin;A.Lopes Dos Santos;R.Christen;D.Vaulot

Description

1 and 2. Data S1. Fasta and taxo files of annoted Chlorophyta GenBank sequences. Two files containing sequences in fasta format and their annotated taxonomy. These files can be used to assign metabarcoding data using software such as mothur or Qiime.

3. Data S2. Chlorophyta sequences metadata.

4. Data S3. Fasta file of the reference MAFFT alignment for the phylogenetic tree (Fig.1). 132 rRNA 18S reference sequences (Supplementary Table S1) provide a length alignment of 1752 bp. Alignment was stripped at 50% (columns of the alignment counting more than 50% gaps were deleted).

Citations (0)

Mentions (0)

Metrics

Dataset Index

2.1

FAIR Score

85%

Citations

0

Mentions

0

Metrics Over Time

Publication Details

DOI

Publisher

figshare

Assigned Domain

Subfield

Renewable Energy, Sustainability and the Environment

Field

Energy

Domain

Physical Sciences

Confidence Score

85%

Source

Open Alex

Keywords

Marine Biology60102 BioinformaticsFOS: Computer and information sciences

Normalization Factors

FT

13.46

CTw

1.00

MTw

1.00