Published on 01 January 2016
Additional file 3: of Cell wall dynamics during apple development and storage involves hemicellulose modifications and related expressed genes
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Cell wall related selected genes and proteins annotation. Selection of 115 genes potentially involved in the cell wall dynamic during apple development, maturation and cold storage. Gene annotation was deduced from sequence similarity with Arabidopsis genes (TAIR, MapMan). Protein annotation was search in ProtannDB, CAZy and Peroxibase data bases. CAZy annotations: glycosyl transferases (GT), glycosyl hydrolase (GH), polysaccharide lyase (PL), carbohydrate esterase (CE), auxiliary activity (AA). The sub-cellular localization of the deduced proteins was predicted using ProtAnnDB and Peroxibase databases. Number of protein transmembrane domains was search using tmhmm. (XLSX 154Â kb)
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Cited on 15 September 2016
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Publication Details
Subfield
Cell Biology
Field
Biochemistry, Genetics and Molecular Biology
Domain
Life Sciences
Confidence Score
98%
Source
Open Alex