Published on 01 January 2016

Additional file 3: of Cell wall dynamics during apple development and storage involves hemicellulose modifications and related expressed genes

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Dheilly, Emmanuelle;Gall, Sophie;Marie-Charlotte Guillou;Renou, Jean-Pierre;Bonnin, Estelle;Orsel, Mathilde;Lahaye, Marc

Description

Cell wall related selected genes and proteins annotation. Selection of 115 genes potentially involved in the cell wall dynamic during apple development, maturation and cold storage. Gene annotation was deduced from sequence similarity with Arabidopsis genes (TAIR, MapMan). Protein annotation was search in ProtannDB, CAZy and Peroxibase data bases. CAZy annotations: glycosyl transferases (GT), glycosyl hydrolase (GH), polysaccharide lyase (PL), carbohydrate esterase (CE), auxiliary activity (AA). The sub-cellular localization of the deduced proteins was predicted using ProtAnnDB and Peroxibase databases. Number of protein transmembrane domains was search using tmhmm. (XLSX 154Â kb)

Citations (1)

Mentions (0)

Metrics

Dataset Index

0.7

FAIR Score

13%

Citations

1

Mentions

0

Metrics Over Time

Publication Details

Assigned Domain

Subfield

Cell Biology

Field

Biochemistry, Genetics and Molecular Biology

Domain

Life Sciences

Confidence Score

98%

Source

Open Alex

Keywords

BiophysicsBiochemistryCell BiologyGeneticsFOS: Biological sciencesMolecular BiologyBiotechnologyEvolutionary BiologyImmunologyFOS: Clinical medicine69999 Biological Sciences not elsewhere classified80699 Information Systems not elsewhere classifiedFOS: Computer and information sciencesDevelopmental BiologyCancerInorganic ChemistryFOS: Chemical sciences110309 Infectious DiseasesFOS: Health sciencesPlant Biology

Normalization Factors

FT

13.46

CTw

1.00

MTw

1.00